Cluster: MGYG000001279_CGC12
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000001279
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000001279_94 | MGYG000001279_94_4 | 1811 | 3430 | - | 2.A.1.6.11 |
| CAZyme | MGYG000001279_94 | MGYG000001279_94_5 | 3524 | 5170 | - | AA3_2 |
| TF | MGYG000001279_94 | MGYG000001279_94_6 | 5340 | 6227 | + | HTH_1 |
| TC | MGYG000001279_94 | MGYG000001279_94_7 | 6216 | 7034 | - | 2.A.102.4.2 |
Gene ID: MGYG000001279_94_4
Type: TC
Location: 1811 - 3430 (-)
Type: TC
Location: 1811 - 3430 (-)
Gene ID: MGYG000001279_94_5
Type: CAZyme
Location: 3524 - 5170 (-)
Type: CAZyme
Location: 3524 - 5170 (-)
Gene ID: MGYG000001279_94_6
Type: TF
Location: 5340 - 6227 (+)
Type: TF
Location: 5340 - 6227 (+)
Gene ID: MGYG000001279_94_7
Type: TC
Location: 6216 - 7034 (-)
Type: TC
Location: 6216 - 7034 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas_E
Species
Pseudomonas_E fulva
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.