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Cluster: MGYG000001208_CGC28

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000001208_18 MGYG000001208_18_27 23884 24633 - 1.A.1.17.2
STP MGYG000001208_18 MGYG000001208_18_28 24831 25940 + Pyr_redox_2
TC MGYG000001208_18 MGYG000001208_18_29 26603 28606 + 4.A.1.1.13
TF MGYG000001208_18 MGYG000001208_18_30 28638 29354 - HTH_6
pfam MGYG000001208_18 MGYG000001208_18_31 29510 30316 + YdjC
CAZyme MGYG000001208_18 MGYG000001208_18_32 30335 31696 + GH4
TF MGYG000001208_18 MGYG000001208_18_33 31909 32649 - HTH_3
NULL(UNKNOWN) MGYG000001208_18 MGYG000001208_18_34 32653 34344 - NULL(UNKNOWN)
[View Structural Homologs]
TC MGYG000001208_18 MGYG000001208_18_35 34718 35230 - 3.A.1.11.7
Gene ID: MGYG000001208_18_27
Type: TC
Location: 23884 - 24633 (-)
Gene ID: MGYG000001208_18_28
Type: STP
Location: 24831 - 25940 (+)
Gene ID: MGYG000001208_18_29
Type: TC
Location: 26603 - 28606 (+)
Gene ID: MGYG000001208_18_30
Type: TF
Location: 28638 - 29354 (-)
Gene ID: MGYG000001208_18_31
Type: pfam
Location: 29510 - 30316 (+)
Gene ID: MGYG000001208_18_32
Type: CAZyme
Location: 30335 - 31696 (+)
Gene ID: MGYG000001208_18_33
Type: TF
Location: 31909 - 32649 (-)
Gene ID: MGYG000001208_18_34
Type:
Location: 32653 - 34344 (-)
Gene ID: MGYG000001208_18_35
Type: TC
Location: 34718 - 35230 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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