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Cluster: MGYG000001208_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000001208_1 MGYG000001208_1_15 15411 15872 - 4.A.1.1.12
pfam MGYG000001208_1 MGYG000001208_1_16 15865 17247 - Lyase_1 | ADSL_C
TC MGYG000001208_1 MGYG000001208_1_17 17257 18813 - 4.A.1.1.3
TF MGYG000001208_1 MGYG000001208_1_18 18956 20503 + Mga
CAZyme MGYG000001208_1 MGYG000001208_1_19 20619 21650 - GH109
pfam MGYG000001208_1 MGYG000001208_1_20 21703 22671 - AP_endonuc_2
CAZyme MGYG000001208_1 MGYG000001208_1_21 22740 23819 - GH179
TF MGYG000001208_1 MGYG000001208_1_22 24567 25427 + HTH_AraC | HTH_AraC
TC MGYG000001208_1 MGYG000001208_1_23 25616 27046 - 2.A.25.1.4
Gene ID: MGYG000001208_1_15
Type: TC
Location: 15411 - 15872 (-)
Gene ID: MGYG000001208_1_16
Type: pfam
Location: 15865 - 17247 (-)
Gene ID: MGYG000001208_1_17
Type: TC
Location: 17257 - 18813 (-)
Gene ID: MGYG000001208_1_18
Type: TF
Location: 18956 - 20503 (+)
Gene ID: MGYG000001208_1_19
Type: CAZyme
Location: 20619 - 21650 (-)
Gene ID: MGYG000001208_1_20
Type: pfam
Location: 21703 - 22671 (-)
Gene ID: MGYG000001208_1_21
Type: CAZyme
Location: 22740 - 23819 (-)
Gene ID: MGYG000001208_1_22
Type: TF
Location: 24567 - 25427 (+)
Gene ID: MGYG000001208_1_23
Type: TC
Location: 25616 - 27046 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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