Cluster: MGYG000000964_CGC42
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000000964
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000000964_63 | MGYG000000964_63_2 | 509 | 2536 | + | 3.A.16.1.1 |
| pfam | MGYG000000964_63 | MGYG000000964_63_3 | 2526 | 3362 | + | CTP_transf_1 |
| CAZyme | MGYG000000964_63 | MGYG000000964_63_4 | 3605 | 4756 | - | GT19 |
| pfam | MGYG000000964_63 | MGYG000000964_63_5 | 4760 | 5512 | - | SurE |
| TC | MGYG000000964_63 | MGYG000000964_63_6 | 5932 | 6696 | + | 8.A.3.2.3 |
| pfam | MGYG000000964_63 | MGYG000000964_63_7 | 6724 | 7623 | + | ParBc | HTH_ParB | ParB_dimer |
| pfam | MGYG000000964_63 | MGYG000000964_63_8 | 7637 | 8428 | + | DUF5683 |
| CAZyme | MGYG000000964_63 | MGYG000000964_63_9 | 8433 | 9671 | + | GH23 |
| STP | MGYG000000964_63 | MGYG000000964_63_10 | 9752 | 12028 | + | HD |
| TF | MGYG000000964_63 | MGYG000000964_63_11 | 12041 | 12388 | - | MerR |
| TC | MGYG000000964_63 | MGYG000000964_63_12 | 12404 | 13372 | - | 1.A.34.1.3 |
Gene ID: MGYG000000964_63_2
Type: TC
Location: 509 - 2536 (+)
Type: TC
Location: 509 - 2536 (+)
Gene ID: MGYG000000964_63_3
Type: pfam
Location: 2526 - 3362 (+)
Type: pfam
Location: 2526 - 3362 (+)
Gene ID: MGYG000000964_63_4
Type: CAZyme
Location: 3605 - 4756 (-)
Type: CAZyme
Location: 3605 - 4756 (-)
Gene ID: MGYG000000964_63_5
Type: pfam
Location: 4760 - 5512 (-)
Type: pfam
Location: 4760 - 5512 (-)
Gene ID: MGYG000000964_63_6
Type: TC
Location: 5932 - 6696 (+)
Type: TC
Location: 5932 - 6696 (+)
Gene ID: MGYG000000964_63_7
Type: pfam
Location: 6724 - 7623 (+)
Type: pfam
Location: 6724 - 7623 (+)
Gene ID: MGYG000000964_63_8
Type: pfam
Location: 7637 - 8428 (+)
Type: pfam
Location: 7637 - 8428 (+)
Gene ID: MGYG000000964_63_9
Type: CAZyme
Location: 8433 - 9671 (+)
Type: CAZyme
Location: 8433 - 9671 (+)
Gene ID: MGYG000000964_63_10
Type: STP
Location: 9752 - 12028 (+)
Type: STP
Location: 9752 - 12028 (+)
Gene ID: MGYG000000964_63_11
Type: TF
Location: 12041 - 12388 (-)
Type: TF
Location: 12041 - 12388 (-)
Gene ID: MGYG000000964_63_12
Type: TC
Location: 12404 - 13372 (-)
Type: TC
Location: 12404 - 13372 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Species
Phocaeicola salanitronis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.