Cluster: MGYG000000964_CGC35
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 4
- Substrate:
- Genome ID: MGYG000000964
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000000964_35 | MGYG000000964_35_1 | 76 | 2004 | + | GH43_19 | GH43_34 |
| CAZyme | MGYG000000964_35 | MGYG000000964_35_2 | 2016 | 4505 | + | GH51_2 |
| NULL(UNKNOWN) | MGYG000000964_35 | MGYG000000964_35_3 | 4596 | 5051 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | MGYG000000964_35 | MGYG000000964_35_4 | 5048 | 5503 | - | DUF3990 |
| TC | MGYG000000964_35 | MGYG000000964_35_5 | 5518 | 7167 | - | 1.B.9.4.2 |
| NULL(UNKNOWN) | MGYG000000964_35 | MGYG000000964_35_6 | 7207 | 8424 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | MGYG000000964_35 | MGYG000000964_35_7 | 8740 | 8967 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000000964_35 | MGYG000000964_35_8 | 9062 | 12097 | + | 1.B.14.6.1 |
| pfam | MGYG000000964_35 | MGYG000000964_35_9 | 12119 | 13783 | + | SusD_RagB |
| NULL(UNKNOWN) | MGYG000000964_35 | MGYG000000964_35_10 | 14067 | 14201 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000000964_35 | MGYG000000964_35_11 | 14465 | 17482 | + | 1.B.14.6.1 |
| pfam | MGYG000000964_35 | MGYG000000964_35_12 | 17504 | 19165 | + | SusD_RagB |
| CAZyme | MGYG000000964_35 | MGYG000000964_35_13 | 19457 | 21718 | + | GH92 |
| pfam | MGYG000000964_35 | MGYG000000964_35_14 | 21694 | 23001 | + | GDPD |
| CAZyme | MGYG000000964_35 | MGYG000000964_35_15 | 23300 | 25228 | - | GH146 |
Gene ID: MGYG000000964_35_1
Type: CAZyme
Location: 76 - 2004 (+)
Type: CAZyme
Location: 76 - 2004 (+)
Gene ID: MGYG000000964_35_2
Type: CAZyme
Location: 2016 - 4505 (+)
Type: CAZyme
Location: 2016 - 4505 (+)
Gene ID: MGYG000000964_35_3
Type:
Location: 4596 - 5051 (-)
Type:
Location: 4596 - 5051 (-)
Gene ID: MGYG000000964_35_4
Type: pfam
Location: 5048 - 5503 (-)
Type: pfam
Location: 5048 - 5503 (-)
Gene ID: MGYG000000964_35_5
Type: TC
Location: 5518 - 7167 (-)
Type: TC
Location: 5518 - 7167 (-)
Gene ID: MGYG000000964_35_6
Type:
Location: 7207 - 8424 (-)
Type:
Location: 7207 - 8424 (-)
Gene ID: MGYG000000964_35_7
Type:
Location: 8740 - 8967 (-)
Type:
Location: 8740 - 8967 (-)
Gene ID: MGYG000000964_35_8
Type: TC
Location: 9062 - 12097 (+)
Type: TC
Location: 9062 - 12097 (+)
Gene ID: MGYG000000964_35_9
Type: pfam
Location: 12119 - 13783 (+)
Type: pfam
Location: 12119 - 13783 (+)
Gene ID: MGYG000000964_35_10
Type:
Location: 14067 - 14201 (+)
Type:
Location: 14067 - 14201 (+)
Gene ID: MGYG000000964_35_11
Type: TC
Location: 14465 - 17482 (+)
Type: TC
Location: 14465 - 17482 (+)
Gene ID: MGYG000000964_35_12
Type: pfam
Location: 17504 - 19165 (+)
Type: pfam
Location: 17504 - 19165 (+)
Gene ID: MGYG000000964_35_13
Type: CAZyme
Location: 19457 - 21718 (+)
Type: CAZyme
Location: 19457 - 21718 (+)
Gene ID: MGYG000000964_35_14
Type: pfam
Location: 21694 - 23001 (+)
Type: pfam
Location: 21694 - 23001 (+)
Gene ID: MGYG000000964_35_15
Type: CAZyme
Location: 23300 - 25228 (-)
Type: CAZyme
Location: 23300 - 25228 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Species
Phocaeicola salanitronis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.