Cluster: MGYG000000964_CGC10
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000000964
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000000964_6 | MGYG000000964_6_2 | 3498 | 5480 | - | GH43_17 | GH43_19 |
| pfam | MGYG000000964_6 | MGYG000000964_6_3 | 5604 | 6614 | - | Semialdhyde_dh | Semialdhyde_dhC |
| TC | MGYG000000964_6 | MGYG000000964_6_4 | 6796 | 8943 | + | 2.A.37.2.5 |
| TC | MGYG000000964_6 | MGYG000000964_6_5 | 8940 | 9662 | + | 3.A.16.1.3 |
| TC | MGYG000000964_6 | MGYG000000964_6_6 | 9669 | 10319 | + | 3.A.1.125.1 |
| pfam | MGYG000000964_6 | MGYG000000964_6_7 | 10312 | 11145 | - | RibD_C |
| TC | MGYG000000964_6 | MGYG000000964_6_8 | 11485 | 14568 | + | 1.B.14.6.1 |
Gene ID: MGYG000000964_6_2
Type: CAZyme
Location: 3498 - 5480 (-)
Type: CAZyme
Location: 3498 - 5480 (-)
Gene ID: MGYG000000964_6_3
Type: pfam
Location: 5604 - 6614 (-)
Type: pfam
Location: 5604 - 6614 (-)
Gene ID: MGYG000000964_6_4
Type: TC
Location: 6796 - 8943 (+)
Type: TC
Location: 6796 - 8943 (+)
Gene ID: MGYG000000964_6_5
Type: TC
Location: 8940 - 9662 (+)
Type: TC
Location: 8940 - 9662 (+)
Gene ID: MGYG000000964_6_6
Type: TC
Location: 9669 - 10319 (+)
Type: TC
Location: 9669 - 10319 (+)
Gene ID: MGYG000000964_6_7
Type: pfam
Location: 10312 - 11145 (-)
Type: pfam
Location: 10312 - 11145 (-)
Gene ID: MGYG000000964_6_8
Type: TC
Location: 11485 - 14568 (+)
Type: TC
Location: 11485 - 14568 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Species
Phocaeicola salanitronis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.