Cluster: MGYG000000842_CGC8
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000000842
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000000842_4 | MGYG000000842_4_38 | 45884 | 47017 | + | GT2 |
| sulfatase | MGYG000000842_4 | MGYG000000842_4_39 | 47179 | 49920 | + | S1_2 |
| pfam | MGYG000000842_4 | MGYG000000842_4_40 | 50127 | 50969 | - | S6PP | Hydrolase_3 |
| TC | MGYG000000842_4 | MGYG000000842_4_41 | 51400 | 52320 | + | 3.A.1.3.20 |
| TC | MGYG000000842_4 | MGYG000000842_4_42 | 52425 | 53624 | + | 3.A.1.3.17 |
| TC | MGYG000000842_4 | MGYG000000842_4_43 | 53628 | 54404 | + | 3.A.1.3.20 |
Gene ID: MGYG000000842_4_38
Type: CAZyme
Location: 45884 - 47017 (+)
Type: CAZyme
Location: 45884 - 47017 (+)
Gene ID: MGYG000000842_4_39
Type: sulfatase
Location: 47179 - 49920 (+)
Type: sulfatase
Location: 47179 - 49920 (+)
Gene ID: MGYG000000842_4_40
Type: pfam
Location: 50127 - 50969 (-)
Type: pfam
Location: 50127 - 50969 (-)
Gene ID: MGYG000000842_4_41
Type: TC
Location: 51400 - 52320 (+)
Type: TC
Location: 51400 - 52320 (+)
Gene ID: MGYG000000842_4_42
Type: TC
Location: 52425 - 53624 (+)
Type: TC
Location: 52425 - 53624 (+)
Gene ID: MGYG000000842_4_43
Type: TC
Location: 53628 - 54404 (+)
Type: TC
Location: 53628 - 54404 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp900540845
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.