Cluster: MGYG000000842_CGC17
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000000842
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000000842_10 | MGYG000000842_10_24 | 22871 | 24550 | + | 3.A.1.120.6 |
| NULL(UNKNOWN) | MGYG000000842_10 | MGYG000000842_10_25 | 24619 | 26073 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | MGYG000000842_10 | MGYG000000842_10_26 | 26164 | 27222 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000000842_10 | MGYG000000842_10_27 | 27397 | 28416 | - | GT2 |
Gene ID: MGYG000000842_10_24
Type: TC
Location: 22871 - 24550 (+)
Type: TC
Location: 22871 - 24550 (+)
Gene ID: MGYG000000842_10_25
Type:
Location: 24619 - 26073 (-)
Type:
Location: 24619 - 26073 (-)
Gene ID: MGYG000000842_10_26
Type:
Location: 26164 - 27222 (-)
Type:
Location: 26164 - 27222 (-)
Gene ID: MGYG000000842_10_27
Type: CAZyme
Location: 27397 - 28416 (-)
Type: CAZyme
Location: 27397 - 28416 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp900540845
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.