Cluster: MGYG000000392_CGC7
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000000392
- CGC Family ID: CGCFAM_00139
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000000392_3 | MGYG000000392_3_24 | 25490 | 26269 | - | CE1 |
| NULL(UNKNOWN) | MGYG000000392_3 | MGYG000000392_3_25 | 26366 | 26794 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | MGYG000000392_3 | MGYG000000392_3_26 | 26803 | 27360 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000000392_3 | MGYG000000392_3_27 | 27529 | 29061 | + | GH13_44 |
| pfam | MGYG000000392_3 | MGYG000000392_3_28 | 29119 | 30276 | - | DHHW | ALGX |
| TC | MGYG000000392_3 | MGYG000000392_3_29 | 30291 | 31685 | - | 2.A.50.2.1 |
Gene ID: MGYG000000392_3_24
Type: CAZyme
Location: 25490 - 26269 (-)
Type: CAZyme
Location: 25490 - 26269 (-)
Gene ID: MGYG000000392_3_25
Type:
Location: 26366 - 26794 (+)
Type:
Location: 26366 - 26794 (+)
Gene ID: MGYG000000392_3_26
Type:
Location: 26803 - 27360 (-)
Type:
Location: 26803 - 27360 (-)
Gene ID: MGYG000000392_3_27
Type: CAZyme
Location: 27529 - 29061 (+)
Type: CAZyme
Location: 27529 - 29061 (+)
Gene ID: MGYG000000392_3_28
Type: pfam
Location: 29119 - 30276 (-)
Type: pfam
Location: 29119 - 30276 (-)
Gene ID: MGYG000000392_3_29
Type: TC
Location: 30291 - 31685 (-)
Type: TC
Location: 30291 - 31685 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Ruminococcus_E
Species
Ruminococcus_E sp003521625
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.