Cluster: MGYG000000303_CGC6
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000000303
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000000303_3 | MGYG000000303_3_43 | 57652 | 59145 | - | 2.A.1.12.1 |
| CAZyme | MGYG000000303_3 | MGYG000000303_3_44 | 59242 | 61560 | - | GH33 |
| NULL(UNKNOWN) | MGYG000000303_3 | MGYG000000303_3_45 | 62100 | 62609 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000000303_3 | MGYG000000303_3_46 | 62781 | 63287 | + | 3.D.1.8.1 |
| peptidase | MGYG000000303_3 | MGYG000000303_3_47 | 63340 | 64053 | + | S54.UPW |
| TC | MGYG000000303_3 | MGYG000000303_3_48 | 64277 | 66751 | + | 3.A.9.1.2 |
Gene ID: MGYG000000303_3_43
Type: TC
Location: 57652 - 59145 (-)
Type: TC
Location: 57652 - 59145 (-)
Gene ID: MGYG000000303_3_44
Type: CAZyme
Location: 59242 - 61560 (-)
Type: CAZyme
Location: 59242 - 61560 (-)
Gene ID: MGYG000000303_3_45
Type:
Location: 62100 - 62609 (-)
Type:
Location: 62100 - 62609 (-)
Gene ID: MGYG000000303_3_46
Type: TC
Location: 62781 - 63287 (+)
Type: TC
Location: 62781 - 63287 (+)
Gene ID: MGYG000000303_3_47
Type: peptidase
Location: 63340 - 64053 (+)
Type: peptidase
Location: 63340 - 64053 (+)
Gene ID: MGYG000000303_3_48
Type: TC
Location: 64277 - 66751 (+)
Type: TC
Location: 64277 - 66751 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Varibaculum
Species
Varibaculum cambriense_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.