Cluster: MGYG000000303_CGC13
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000000303
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000000303_7 | MGYG000000303_7_19 | 42588 | 43709 | - | GT28 |
| TC | MGYG000000303_7 | MGYG000000303_7_20 | 43696 | 45045 | - | 2.A.103.1.3 |
| pfam | MGYG000000303_7 | MGYG000000303_7_21 | 45048 | 46487 | - | Mur_ligase_C | Mur_ligase_M |
| TC | MGYG000000303_7 | MGYG000000303_7_22 | 46484 | 47596 | - | 9.B.146.1.6 |
Gene ID: MGYG000000303_7_19
Type: CAZyme
Location: 42588 - 43709 (-)
Type: CAZyme
Location: 42588 - 43709 (-)
Gene ID: MGYG000000303_7_20
Type: TC
Location: 43696 - 45045 (-)
Type: TC
Location: 43696 - 45045 (-)
Gene ID: MGYG000000303_7_21
Type: pfam
Location: 45048 - 46487 (-)
Type: pfam
Location: 45048 - 46487 (-)
Gene ID: MGYG000000303_7_22
Type: TC
Location: 46484 - 47596 (-)
Type: TC
Location: 46484 - 47596 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Varibaculum
Species
Varibaculum cambriense_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.