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Cluster: KY014_20_CGC23

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_101747 k141_101747_187 202651 204141 + 1.B.52.2.2
pfam k141_101747 k141_101747_188 204195 205376 + Flavin_Reduct | Rubrerythrin | RUBY_RBDX | RUBY_RBDX
pfam k141_101747 k141_101747_189 205672 206874 + CBM26 | CBM26 | CBM26
TC k141_101747 k141_101747_190 206876 208105 + 3.A.1.1.16
TC k141_101747 k141_101747_191 208151 209080 + 3.A.1.1.2
TC k141_101747 k141_101747_192 209073 209915 + 3.A.1.1.2
CAZyme k141_101747 k141_101747_193 209933 211687 + CBM34 | GH13_20
TF k141_101747 k141_101747_194 211721 212740 + LacI
TC k141_101747 k141_101747_195 212941 214581 + 3.A.1.121.4
pfam k141_101747 k141_101747_196 214583 216271 + PHP | S6PP | S6PP | Hydrolase_3
TC k141_101747 k141_101747_197 216290 217615 + 2.A.1.2.88
pfam k141_101747 k141_101747_198 217640 218512 + GDPD
TC k141_101747 k141_101747_199 218697 221324 + 4.A.2.1.17
Gene ID: k141_101747_187
Type: TC
Location: 202651 - 204141 (+)
Gene ID: k141_101747_188
Type: pfam
Location: 204195 - 205376 (+)
Gene ID: k141_101747_189
Type: pfam
Location: 205672 - 206874 (+)
Gene ID: k141_101747_190
Type: TC
Location: 206876 - 208105 (+)
Gene ID: k141_101747_191
Type: TC
Location: 208151 - 209080 (+)
Gene ID: k141_101747_192
Type: TC
Location: 209073 - 209915 (+)
Gene ID: k141_101747_193
Type: CAZyme
Location: 209933 - 211687 (+)
Gene ID: k141_101747_194
Type: TF
Location: 211721 - 212740 (+)
Gene ID: k141_101747_195
Type: TC
Location: 212941 - 214581 (+)
Gene ID: k141_101747_196
Type: pfam
Location: 214583 - 216271 (+)
Gene ID: k141_101747_197
Type: TC
Location: 216290 - 217615 (+)
Gene ID: k141_101747_198
Type: pfam
Location: 217640 - 218512 (+)
Gene ID: k141_101747_199
Type: TC
Location: 218697 - 221324 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_101747_190 vegetarian > vegan 1.20227 0.00360

🧭 Explore Read Mapping of CGC

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