dbCAN Logo

Cluster: KY014_20_CGC22

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_101747 k141_101747_177 187679 188980 + 1.E.43.3.3
pfam k141_101747 k141_101747_178 189047 190102 + GcpE
pfam k141_101747 k141_101747_179 190106 194656 + RNase_T | PHP | DNA_pol3_alpha | DNA_pol3_alpha | RNase_H_2 | DNA_pol3_a_NI | HHH_6 | Rv2179c-like | DNA_pol3_finger
CAZyme k141_101747 k141_101747_180 194766 196583 + GH146
Gene ID: k141_101747_177
Type: TC
Location: 187679 - 188980 (+)
Gene ID: k141_101747_178
Type: pfam
Location: 189047 - 190102 (+)
Gene ID: k141_101747_179
Type: pfam
Location: 190106 - 194656 (+)
Gene ID: k141_101747_180
Type: CAZyme
Location: 194766 - 196583 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_101747_178 vegan > omnivore 1.05275 0.00181

🧭 Explore Read Mapping of CGC

← Back to Cluster List