dbCAN Logo

Cluster: HRGMv2_4820_CGC22

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4820_45 HRGMv2_4820_45_2 700 1791 - GT4
TC HRGMv2_4820_45 HRGMv2_4820_45_3 2332 3069 - 9.B.18.1.2
NULL(UNKNOWN) HRGMv2_4820_45 HRGMv2_4820_45_4 3346 4119 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_4820_45 HRGMv2_4820_45_5 4123 4950 - GT2
CAZyme HRGMv2_4820_45 HRGMv2_4820_45_6 4947 5969 - GT2
STP HRGMv2_4820_45 HRGMv2_4820_45_7 6066 6803 + CbiA
NULL(UNKNOWN) HRGMv2_4820_45 HRGMv2_4820_45_8 6864 8330 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_4820_45 HRGMv2_4820_45_9 8330 9703 + 2.A.66.2.23
Gene ID: HRGMv2_4820_45_2
Type: CAZyme
Location: 700 - 1791 (-)
Gene ID: HRGMv2_4820_45_3
Type: TC
Location: 2332 - 3069 (-)
Gene ID: HRGMv2_4820_45_4
Type:
Location: 3346 - 4119 (+)
Gene ID: HRGMv2_4820_45_5
Type: CAZyme
Location: 4123 - 4950 (-)
Gene ID: HRGMv2_4820_45_6
Type: CAZyme
Location: 4947 - 5969 (-)
Gene ID: HRGMv2_4820_45_7
Type: STP
Location: 6066 - 6803 (+)
Gene ID: HRGMv2_4820_45_8
Type:
Location: 6864 - 8330 (+)
Gene ID: HRGMv2_4820_45_9
Type: TC
Location: 8330 - 9703 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List