PROTEIN: HRGMv2_4820_45_8
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Protein File & Metadata
Source:
HRGMv2_4820_45_8.pdb
Genome ID:
Protein ID:
HRGMv2_4820_45_8
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Protein Sequence
MLWRRLPLGL TIIVLGILAS FYMIISSPRV YESSSVIQVD TPAVVEQGSD SSMPASRRVQ 60 LIEQRLMARS NIRDVIKELG LFKDAPGLSE TDKISAVRSS TRIESVQAPG VSADSGMSLA 120 AIVITSRAET AETAAEIANY FTNSLVNRDR ENRQARIVEA REYLMSEEAR LNDALARQDR 180 RLAEFSTRNE DALPSSQEYL QTELSQLNAS EAALDREIMA LQRSRLALEA GGTTADARPS 240 ATVVQQIRTA EVELAQARRT LDPNHPEIKR LEDELTKLNT GGPGSSDVVK RQGELYDIQL 300 GQFDKQRDEM KKRRTEIERA RASAPQVARD LESMMRDQRR QQDRYAEISR QLAQVETQQM 360 LMDNDQTERF VILERALPPE YPALSNRKKS AALGAFASIG LAFAAAFALE FMNPVLRRTS 420 QFTKATGTRP VISLPYRKTG RDLRIKRWSI LYMVLLLAFG IFVALWLLGK IPGLPSPGVV 480 ATPTDGLG 488
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q0P8G9-F1-model_v4 | 6 | 413 | 13 | 372 | 0.5704 |
0.682 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| QTR45648.1 | GT4 | 1 | 439 | 430 | 989 | 0.373 |
0.5715 |
| AF-A0A8B0SMZ4-F1-model_v4 | GT4 | 1 | 442 | 431 | 951 | 0.3701 |
0.5642 |
| A0A2L0WKS9 | GT0 | 1 | 439 | 33 | 729 | 0.3699 |
0.5628 |
| AF-A0A2L0WKS9-F1-model_v4 | GT0 | 1 | 439 | 33 | 729 | 0.3699 |
0.5628 |
| AF-A0A0B4X6N3-F1-model_v4 | GT0 | 1 | 437 | 33 | 506 | 0.3667 |
0.5601 |
| WGH78710.1 | PL1_2 | 1 | 439 | 42 | 649 | 0.3639 |
0.561 |
| AF-A0A1L5NL39-F1-model_v4 | GT0 | 1 | 437 | 33 | 504 | 0.3631 |
0.554 |
| AF-A0A1L5P6C4-F1-model_v4 | GT0 | 1 | 445 | 33 | 763 | 0.3584 |
0.5363 |
Structural Homologs -
CAZyme-ID50
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P57034-F1-model_v4 | 2 | 414 | 25 | 384 | 0.5834 |
0.7109 |
| AF-P22930-F1-model_v4 | 1 | 413 | 12 | 377 | 0.5685 |
0.675 |
| AF-P62587-F1-model_v4 | 4 | 414 | 20 | 382 | 0.5584 |
0.6702 |
| AF-P42501-F1-model_v4 | 4 | 414 | 20 | 382 | 0.5536 |
0.6636 |
| AF-P62586-F1-model_v4 | 4 | 414 | 20 | 382 | 0.5528 |
0.6634 |
| AF-P43111-F1-model_v4 | 3 | 415 | 73 | 434 | 0.5118 |
0.6501 |
| AF-P33698-F1-model_v4 | 1 | 451 | 36 | 519 | 0.437 |
0.5824 |