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Cluster: HRGMv2_4805_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4805_16 HRGMv2_4805_16_9 7941 8678 + GT2
pfam HRGMv2_4805_16 HRGMv2_4805_16_10 8675 9028 + DUF2304
CAZyme HRGMv2_4805_16 HRGMv2_4805_16_11 9025 9795 + GT2
pfam HRGMv2_4805_16 HRGMv2_4805_16_12 9792 11066 + Polysacc_synt | Polysacc_synt_3
NULL(UNKNOWN) HRGMv2_4805_16 HRGMv2_4805_16_13 11059 11952 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_4805_16 HRGMv2_4805_16_14 11991 13058 + GT9
CAZyme HRGMv2_4805_16 HRGMv2_4805_16_15 13055 14137 + GT9
TC HRGMv2_4805_16 HRGMv2_4805_16_16 14140 15099 + 2.A.19.5.2
Gene ID: HRGMv2_4805_16_9
Type: CAZyme
Location: 7941 - 8678 (+)
Gene ID: HRGMv2_4805_16_10
Type: pfam
Location: 8675 - 9028 (+)
Gene ID: HRGMv2_4805_16_11
Type: CAZyme
Location: 9025 - 9795 (+)
Gene ID: HRGMv2_4805_16_12
Type: pfam
Location: 9792 - 11066 (+)
Gene ID: HRGMv2_4805_16_13
Type:
Location: 11059 - 11952 (+)
Gene ID: HRGMv2_4805_16_14
Type: CAZyme
Location: 11991 - 13058 (+)
Gene ID: HRGMv2_4805_16_15
Type: CAZyme
Location: 13055 - 14137 (+)
Gene ID: HRGMv2_4805_16_16
Type: TC
Location: 14140 - 15099 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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