PROTEIN: HRGMv2_4805_16_13
Loading protein structure...
Loading protein structure...
Protein File & Metadata
Source:
HRGMv2_4805_16_13.pdb
Genome ID:
Protein ID:
HRGMv2_4805_16_13
Loading protein structure information...
Detailed structural information will appear here after analysis...
Protein Sequence
MNKAVLLCGF VRYDTISRVF EAVRSARPPR LYLATDGPRA GREDDAANVL KVRSLVEKVD 60 WPCEVKTLFR ENNLGCRAAM SGAIDWFFEN EESGIILEDD CLPGMDFFRF CEELLDRYRD 120 DERIMMIGGT NFMPEVKLDY SYHFSRLCSI WGWATWRRAW CKYDEKMLGF ERLGKENFFS 180 DLATSLPARI WLKWMYDRER KRDRGSWAIP WNCSVWQQNA VAILPSVNLV RNIGFDCRGS 240 NTVDENNMFS KLEIMELNWP LAHPEHLIVS REWDRRYYRR WFYDCLKNYL LRKVGLH 297
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q4DMC0-F1-model_v4 | 1 | 278 | 66 | 367 | 0.6687 |
0.8131 |
| AF-Q4D3G6-F1-model_v4 | 1 | 277 | 66 | 367 | 0.6683 |
0.8153 |
| AF-A0A3P7DV18-F1-model_v4 | 1 | 273 | 42 | 303 | 0.6461 |
0.7549 |
| AF-A0A3P7Q5X9-F1-model_v4 | 1 | 285 | 34 | 346 | 0.6272 |
0.7205 |
| AF-A0A044SGH9-F1-model_v4 | 1 | 297 | 14 | 413 | 0.6093 |
0.7276 |
| AF-A0A044SYE9-F1-model_v4 | 1 | 290 | 48 | 397 | 0.6058 |
0.7208 |
| AF-Q32EF9-F1-model_v4 | 1 | 297 | 4 | 276 | 0.6043 |
0.6801 |
| AF-A0A0K0ETJ8-F1-model_v4 | 1 | 295 | 36 | 430 | 0.5871 |
0.7181 |
| AF-A0A0K0JHB5-F1-model_v4 | 2 | 285 | 76 | 383 | 0.5851 |
0.721 |
| AF-A0A044S5F1-F1-model_v4 | 2 | 285 | 76 | 383 | 0.5842 |
0.72 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| QWE08948.1 | GT0 | 1 | 297 | 4 | 301 | 0.9215 |
0.9446 |
| AF-F5YQA6-F1-model_v4 | GT0 | 1 | 297 | 2 | 303 | 0.9153 |
0.9422 |
| AF-C6W1E6-F1-model_v4 | GT0 | 1 | 295 | 4 | 296 | 0.9123 |
0.9516 |
| AF-A4SVL4-F1-model_v4 | GT0 | 1 | 291 | 4 | 294 | 0.9095 |
0.9473 |
| AF-B2IZQ8-F1-model_v4 | GT0 | 1 | 293 | 1 | 295 | 0.9089 |
0.9489 |
| AF-A0A6P1KTQ9-F1-model_v4 | GT0 | 1 | 292 | 1 | 294 | 0.9047 |
0.9478 |
| AF-A0A2L2N2E5-F1-model_v4 | GT0 | 1 | 290 | 1 | 292 | 0.9015 |
0.9506 |
| AF-A0A2L2NV30-F1-model_v4 | GT0 | 1 | 292 | 1 | 294 | 0.9012 |
0.9448 |
| AF-A0A2K8T1I5-F1-model_v4 | GT0 | 1 | 290 | 1 | 292 | 0.9005 |
0.9498 |
| AF-A0A7D7LC83-F1-model_v4 | GT0 | 1 | 290 | 1 | 292 | 0.898 |
0.9473 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A1B1U5H3 | GT13 | 1 | 293 | 5 | 299 | 0.8355 |
0.8788 |
| WBV42548.1 | GT13 | 2 | 283 | 13 | 304 | 0.6964 |
0.7649 |
| R5FYV9 | GT2 | 1 | 297 | 292 | 585 | 0.6545 |
0.8864 |
| A0A1U9NJE5 | GT2 | 1 | 245 | 1 | 191 | 0.639 |
0.7958 |
| C1EGW4 | GT13 | 3 | 285 | 1 | 312 | 0.6278 |
0.7156 |
| A0A9E9LT15 | GT2 | 1 | 297 | 3 | 272 | 0.6256 |
0.6771 |
| QWD92039.1 | GT2 | 1 | 297 | 2 | 270 | 0.6196 |
0.6705 |
| A0A6G8S514 | GT2 | 1 | 296 | 1 | 231 | 0.6192 |
0.7182 |
| A0A7G5GSK9 | GT2 | 2 | 297 | 3 | 236 | 0.6162 |
0.7124 |
| A0A7U4RQ02 | GT2 | 1 | 297 | 1 | 255 | 0.6153 |
0.7163 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 2apc-assembly1.cif.gz_A | 1 | 285 | 1 | 305 | 0.6272 |
0.7135 |
| 1fo8-assembly1.cif.gz_A | 1 | 285 | 2 | 293 | 0.6048 |
0.6771 |
| 5ggi-assembly1.cif.gz_A | 1 | 286 | 44 | 351 | 0.5979 |
0.7172 |
| 1h7q-assembly1.cif.gz_A | 1 | 278 | 1 | 231 | 0.5739 |
0.6764 |
| 1h7l-assembly1.cif.gz_A | 1 | 278 | 1 | 230 | 0.5737 |
0.6757 |
| 1qgs-assembly1.cif.gz_A | 1 | 278 | 1 | 229 | 0.5733 |
0.678 |
| 5vcs-assembly1.cif.gz_B | 1 | 285 | 30 | 304 | 0.5607 |
0.643 |
| 5ggi-assembly2.cif.gz_B | 1 | 286 | 201 | 508 | 0.5273 |
0.7164 |
| 3pnn-assembly1.cif.gz_A | 1 | 254 | 2 | 287 | 0.5194 |
0.6233 |
| 5ggf-assembly1.cif.gz_A | 1 | 286 | 201 | 493 | 0.5044 |
0.6782 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P39621-F1-model_v4 | 1 | 278 | 2 | 247 | 0.5772 |
0.6611 |
| AF-Q11068-F1-model_v4 | 1 | 289 | 90 | 449 | 0.5758 |
0.7202 |
| AF-Q9XGM8-F1-model_v4 | 1 | 285 | 104 | 406 | 0.5668 |
0.7147 |
| AF-P26572-F1-model_v4 | 1 | 285 | 103 | 408 | 0.5666 |
0.7157 |
| AF-Q09325-F1-model_v4 | 1 | 285 | 105 | 410 | 0.5664 |
0.7164 |
| AF-P27115-F1-model_v4 | 1 | 285 | 105 | 410 | 0.5662 |
0.7162 |
| AF-P27808-F1-model_v4 | 1 | 285 | 105 | 410 | 0.5662 |
0.7164 |
| AF-Q91X88-F1-model_v4 | 1 | 297 | 297 | 659 | 0.5098 |
0.7085 |
| AF-Q5RCB9-F1-model_v4 | 1 | 297 | 297 | 659 | 0.5096 |
0.708 |
| AF-Q5EAB6-F1-model_v4 | 1 | 297 | 297 | 660 | 0.509 |
0.7075 |