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Cluster: HRGMv2_4800_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4800_2 HRGMv2_4800_2_161 169940 170731 - 3.A.1.4.10
pfam HRGMv2_4800_2 HRGMv2_4800_2_162 170836 171816 - AdoHcyase_NAD | KARI_C | 2-Hacid_dh_C | NAD_binding_2 | F420_oxidored | KARI_N
pfam HRGMv2_4800_2 HRGMv2_4800_2_163 172295 173287 + PS_pyruv_trans
CAZyme HRGMv2_4800_2 HRGMv2_4800_2_164 173400 174548 + GT4
CAZyme HRGMv2_4800_2 HRGMv2_4800_2_165 174573 175646 - GT8
STP HRGMv2_4800_2 HRGMv2_4800_2_166 176281 178659 - Fer4
CAZyme HRGMv2_4800_2 HRGMv2_4800_2_167 179187 180242 + GT2
CAZyme HRGMv2_4800_2 HRGMv2_4800_2_168 180316 181308 + GT2
CAZyme HRGMv2_4800_2 HRGMv2_4800_2_169 181330 182370 - GT8
Gene ID: HRGMv2_4800_2_161
Type: TC
Location: 169940 - 170731 (-)
Gene ID: HRGMv2_4800_2_162
Type: pfam
Location: 170836 - 171816 (-)
Gene ID: HRGMv2_4800_2_163
Type: pfam
Location: 172295 - 173287 (+)
Gene ID: HRGMv2_4800_2_164
Type: CAZyme
Location: 173400 - 174548 (+)
Gene ID: HRGMv2_4800_2_165
Type: CAZyme
Location: 174573 - 175646 (-)
Gene ID: HRGMv2_4800_2_166
Type: STP
Location: 176281 - 178659 (-)
Gene ID: HRGMv2_4800_2_167
Type: CAZyme
Location: 179187 - 180242 (+)
Gene ID: HRGMv2_4800_2_168
Type: CAZyme
Location: 180316 - 181308 (+)
Gene ID: HRGMv2_4800_2_169
Type: CAZyme
Location: 181330 - 182370 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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