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Cluster: HRGMv2_4800_CGC33

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4800_16 HRGMv2_4800_16_39 44377 46779 + 9.B.106.2.2
CAZyme HRGMv2_4800_16 HRGMv2_4800_16_40 46801 47868 + PL38
sulfatase HRGMv2_4800_16 HRGMv2_4800_16_41 47879 49567 + S1_16
pfam HRGMv2_4800_16 HRGMv2_4800_16_42 49624 50136 - UDG
CAZyme HRGMv2_4800_16 HRGMv2_4800_16_43 50277 52433 + CBM32 | GH123
Gene ID: HRGMv2_4800_16_39
Type: TC
Location: 44377 - 46779 (+)
Gene ID: HRGMv2_4800_16_40
Type: CAZyme
Location: 46801 - 47868 (+)
Gene ID: HRGMv2_4800_16_41
Type: sulfatase
Location: 47879 - 49567 (+)
Gene ID: HRGMv2_4800_16_42
Type: pfam
Location: 49624 - 50136 (-)
Gene ID: HRGMv2_4800_16_43
Type: CAZyme
Location: 50277 - 52433 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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