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Cluster: HRGMv2_4800_CGC32

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4800_14 HRGMv2_4800_14_74 79991 81232 + 3.D.1.5.1
TC HRGMv2_4800_14 HRGMv2_4800_14_75 81266 81847 + 3.D.1.3.1
TC HRGMv2_4800_14 HRGMv2_4800_14_76 81869 83272 + 3.D.1.3.1
TC HRGMv2_4800_14 HRGMv2_4800_14_77 83295 85031 + 3.D.1.6.2
TC HRGMv2_4800_14 HRGMv2_4800_14_78 85064 86332 + 3.D.1.5.1
STP HRGMv2_4800_14 HRGMv2_4800_14_79 86353 86919 + Fer4
TC HRGMv2_4800_14 HRGMv2_4800_14_80 86930 87577 + 3.D.1.3.1
TC HRGMv2_4800_14 HRGMv2_4800_14_81 87600 87911 + 3.D.1.3.1
TC HRGMv2_4800_14 HRGMv2_4800_14_82 87927 89768 + 3.D.1.3.1
TC HRGMv2_4800_14 HRGMv2_4800_14_83 89790 91244 + 3.D.1.5.1
TC HRGMv2_4800_14 HRGMv2_4800_14_84 91275 92723 + 3.D.1.5.1
pfam HRGMv2_4800_14 HRGMv2_4800_14_85 92970 94424 - PLDc | PLDc | PLDc_2 | PLDc_2
pfam HRGMv2_4800_14 HRGMv2_4800_14_86 94537 94869 - Cupin_2
CAZyme HRGMv2_4800_14 HRGMv2_4800_14_87 94991 96139 + GH33
Gene ID: HRGMv2_4800_14_74
Type: TC
Location: 79991 - 81232 (+)
Gene ID: HRGMv2_4800_14_75
Type: TC
Location: 81266 - 81847 (+)
Gene ID: HRGMv2_4800_14_76
Type: TC
Location: 81869 - 83272 (+)
Gene ID: HRGMv2_4800_14_77
Type: TC
Location: 83295 - 85031 (+)
Gene ID: HRGMv2_4800_14_78
Type: TC
Location: 85064 - 86332 (+)
Gene ID: HRGMv2_4800_14_79
Type: STP
Location: 86353 - 86919 (+)
Gene ID: HRGMv2_4800_14_80
Type: TC
Location: 86930 - 87577 (+)
Gene ID: HRGMv2_4800_14_81
Type: TC
Location: 87600 - 87911 (+)
Gene ID: HRGMv2_4800_14_82
Type: TC
Location: 87927 - 89768 (+)
Gene ID: HRGMv2_4800_14_83
Type: TC
Location: 89790 - 91244 (+)
Gene ID: HRGMv2_4800_14_84
Type: TC
Location: 91275 - 92723 (+)
Gene ID: HRGMv2_4800_14_85
Type: pfam
Location: 92970 - 94424 (-)
Gene ID: HRGMv2_4800_14_86
Type: pfam
Location: 94537 - 94869 (-)
Gene ID: HRGMv2_4800_14_87
Type: CAZyme
Location: 94991 - 96139 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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