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Cluster: HRGMv2_4800_CGC26

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4800_10 HRGMv2_4800_10_14 19837 22143 + 5.A.1.5.3
CAZyme HRGMv2_4800_10 HRGMv2_4800_10_15 22331 24919 - GH89
peptidase HRGMv2_4800_10 HRGMv2_4800_10_16 25137 26213 - M28.UNW
CAZyme HRGMv2_4800_10 HRGMv2_4800_10_17 26246 28081 - GH181
CAZyme HRGMv2_4800_10 HRGMv2_4800_10_18 28050 29666 - GH20
TC HRGMv2_4800_10 HRGMv2_4800_10_19 29673 30515 - 3.A.1.15.3
TC HRGMv2_4800_10 HRGMv2_4800_10_20 30512 31282 - 3.A.1.15.12
NULL(UNKNOWN) HRGMv2_4800_10 HRGMv2_4800_10_21 31276 31719 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_4800_10 HRGMv2_4800_10_22 31765 32730 - 3.A.1.15.15
Gene ID: HRGMv2_4800_10_14
Type: TC
Location: 19837 - 22143 (+)
Gene ID: HRGMv2_4800_10_15
Type: CAZyme
Location: 22331 - 24919 (-)
Gene ID: HRGMv2_4800_10_16
Type: peptidase
Location: 25137 - 26213 (-)
Gene ID: HRGMv2_4800_10_17
Type: CAZyme
Location: 26246 - 28081 (-)
Gene ID: HRGMv2_4800_10_18
Type: CAZyme
Location: 28050 - 29666 (-)
Gene ID: HRGMv2_4800_10_19
Type: TC
Location: 29673 - 30515 (-)
Gene ID: HRGMv2_4800_10_20
Type: TC
Location: 30512 - 31282 (-)
Gene ID: HRGMv2_4800_10_21
Type:
Location: 31276 - 31719 (-)
Gene ID: HRGMv2_4800_10_22
Type: TC
Location: 31765 - 32730 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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