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Cluster: HRGMv2_4800_CGC25

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4800_9 HRGMv2_4800_9_55 75629 78148 + 2.A.1.49.7
CAZyme HRGMv2_4800_9 HRGMv2_4800_9_56 78178 79350 + GH33
pfam HRGMv2_4800_9 HRGMv2_4800_9_57 79386 80147 + Lipase_GDSL | Lipase_GDSL_2
CAZyme HRGMv2_4800_9 HRGMv2_4800_9_58 80362 82503 - GH2
CAZyme HRGMv2_4800_9 HRGMv2_4800_9_59 82636 84714 - GH2
pfam HRGMv2_4800_9 HRGMv2_4800_9_60 84824 86362 - Metalloenzyme | iPGM_N
NULL(UNKNOWN) HRGMv2_4800_9 HRGMv2_4800_9_61 86441 86782 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_4800_9 HRGMv2_4800_9_62 87434 88534 + 2.A.64.1.3
peptidase HRGMv2_4800_9 HRGMv2_4800_9_63 88716 89210 - I51.UPW
TC HRGMv2_4800_9 HRGMv2_4800_9_64 89344 90057 - 1.A.14.2.2
CAZyme HRGMv2_4800_9 HRGMv2_4800_9_65 90332 92602 + GH3
CAZyme HRGMv2_4800_9 HRGMv2_4800_9_66 92685 95108 - GH127
Gene ID: HRGMv2_4800_9_55
Type: TC
Location: 75629 - 78148 (+)
Gene ID: HRGMv2_4800_9_56
Type: CAZyme
Location: 78178 - 79350 (+)
Gene ID: HRGMv2_4800_9_57
Type: pfam
Location: 79386 - 80147 (+)
Gene ID: HRGMv2_4800_9_58
Type: CAZyme
Location: 80362 - 82503 (-)
Gene ID: HRGMv2_4800_9_59
Type: CAZyme
Location: 82636 - 84714 (-)
Gene ID: HRGMv2_4800_9_60
Type: pfam
Location: 84824 - 86362 (-)
Gene ID: HRGMv2_4800_9_61
Type:
Location: 86441 - 86782 (-)
Gene ID: HRGMv2_4800_9_62
Type: TC
Location: 87434 - 88534 (+)
Gene ID: HRGMv2_4800_9_63
Type: peptidase
Location: 88716 - 89210 (-)
Gene ID: HRGMv2_4800_9_64
Type: TC
Location: 89344 - 90057 (-)
Gene ID: HRGMv2_4800_9_65
Type: CAZyme
Location: 90332 - 92602 (+)
Gene ID: HRGMv2_4800_9_66
Type: CAZyme
Location: 92685 - 95108 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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