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Cluster: HRGMv2_4800_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4800_5 HRGMv2_4800_5_119 141914 143152 - 9.B.169.1.1
pfam HRGMv2_4800_5 HRGMv2_4800_5_120 143162 144403 - MFS_1
pfam HRGMv2_4800_5 HRGMv2_4800_5_121 144400 145275 - DUF3737
TC HRGMv2_4800_5 HRGMv2_4800_5_122 145294 146229 - 2.A.7.3.22
peptidase HRGMv2_4800_5 HRGMv2_4800_5_123 146294 147358 - S09.UNW
TF HRGMv2_4800_5 HRGMv2_4800_5_124 147556 148479 + AraC_N | HTH_AraC
CAZyme HRGMv2_4800_5 HRGMv2_4800_5_125 148560 151424 - GH84
Gene ID: HRGMv2_4800_5_119
Type: TC
Location: 141914 - 143152 (-)
Gene ID: HRGMv2_4800_5_120
Type: pfam
Location: 143162 - 144403 (-)
Gene ID: HRGMv2_4800_5_121
Type: pfam
Location: 144400 - 145275 (-)
Gene ID: HRGMv2_4800_5_122
Type: TC
Location: 145294 - 146229 (-)
Gene ID: HRGMv2_4800_5_123
Type: peptidase
Location: 146294 - 147358 (-)
Gene ID: HRGMv2_4800_5_124
Type: TF
Location: 147556 - 148479 (+)
Gene ID: HRGMv2_4800_5_125
Type: CAZyme
Location: 148560 - 151424 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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