Cluster: HRGMv2_4800_CGC19
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4800
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4800_5 | HRGMv2_4800_5_85 | 102554 | 103972 | + | 2.A.114.1.4 |
| NULL(UNKNOWN) | HRGMv2_4800_5 | HRGMv2_4800_5_86 | 103982 | 104503 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_4800_5 | HRGMv2_4800_5_87 | 104673 | 106010 | + | CE4 |
Gene ID: HRGMv2_4800_5_85
Type: TC
Location: 102554 - 103972 (+)
Type: TC
Location: 102554 - 103972 (+)
Gene ID: HRGMv2_4800_5_86
Type:
Location: 103982 - 104503 (-)
Type:
Location: 103982 - 104503 (-)
Gene ID: HRGMv2_4800_5_87
Type: CAZyme
Location: 104673 - 106010 (+)
Type: CAZyme
Location: 104673 - 106010 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Verrucomicrobiales
Family
Akkermansiaceae
Genus
Akkermansia
Species
Akkermansia glycaniphila
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.