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Cluster: HRGMv2_4800_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4800_3 HRGMv2_4800_3_99 100747 103008 + CBM35
TC HRGMv2_4800_3 HRGMv2_4800_3_100 103238 104257 + 3.A.1.23.5
pfam HRGMv2_4800_3 HRGMv2_4800_3_101 104270 105076 + CbiQ
TC HRGMv2_4800_3 HRGMv2_4800_3_102 105081 105803 + 3.A.1.23.8
TC HRGMv2_4800_3 HRGMv2_4800_3_103 106015 107040 + 2.A.59.1.2
TC HRGMv2_4800_3 HRGMv2_4800_3_104 107172 108455 - 2.A.1.49.7
Gene ID: HRGMv2_4800_3_99
Type: CAZyme
Location: 100747 - 103008 (+)
Gene ID: HRGMv2_4800_3_100
Type: TC
Location: 103238 - 104257 (+)
Gene ID: HRGMv2_4800_3_101
Type: pfam
Location: 104270 - 105076 (+)
Gene ID: HRGMv2_4800_3_102
Type: TC
Location: 105081 - 105803 (+)
Gene ID: HRGMv2_4800_3_103
Type: TC
Location: 106015 - 107040 (+)
Gene ID: HRGMv2_4800_3_104
Type: TC
Location: 107172 - 108455 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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