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Cluster: HRGMv2_4798_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4798_3 HRGMv2_4798_3_11 8755 10083 - GT30
TC HRGMv2_4798_3 HRGMv2_4798_3_12 10275 12044 - 3.A.1.106.1
CAZyme HRGMv2_4798_3 HRGMv2_4798_3_13 12034 13173 - GT19
pfam HRGMv2_4798_3 HRGMv2_4798_3_14 13170 13994 - LpxI_C | LpxI_N
TC HRGMv2_4798_3 HRGMv2_4798_3_15 14202 15458 - 2.A.23.4.1
TC HRGMv2_4798_3 HRGMv2_4798_3_16 15852 17111 - 2.A.23.4.1
NULL(UNKNOWN) HRGMv2_4798_3 HRGMv2_4798_3_17 17304 17963 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_4798_3 HRGMv2_4798_3_18 17953 19335 - 9.A.40.2.2
Gene ID: HRGMv2_4798_3_11
Type: CAZyme
Location: 8755 - 10083 (-)
Gene ID: HRGMv2_4798_3_12
Type: TC
Location: 10275 - 12044 (-)
Gene ID: HRGMv2_4798_3_13
Type: CAZyme
Location: 12034 - 13173 (-)
Gene ID: HRGMv2_4798_3_14
Type: pfam
Location: 13170 - 13994 (-)
Gene ID: HRGMv2_4798_3_15
Type: TC
Location: 14202 - 15458 (-)
Gene ID: HRGMv2_4798_3_16
Type: TC
Location: 15852 - 17111 (-)
Gene ID: HRGMv2_4798_3_17
Type:
Location: 17304 - 17963 (-)
Gene ID: HRGMv2_4798_3_18
Type: TC
Location: 17953 - 19335 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_C
→
Class
Negativicutes
→
Order
Veillonellales
→
Family
Dialisteraceae
→
Genus
Dialister
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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