PROTEIN: HRGMv2_4798_3_17
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Protein File & Metadata
Source:
HRGMv2_4798_3_17.pdb
Genome ID:
Protein ID:
HRGMv2_4798_3_17
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Protein Sequence
MKGEVRNGEG IVLRSRQGRE GSKVLTLFSV EKGKIHLILP RPVMAKWGSG LSAPFALIRF 60 TASFFSDYAV LSQYEGWLLF DMMKLSYEEM CAWYYLIELA DQLFPLGEKD ETAYHILLQA 120 GKAEEKRNGM VVSFIASVKL LGAAGFDAAS PEEAKKFHLS QEGLSLLTAF RQYRWGEPLG 180 RTIPRSLFQE TAAYVDAFIR NVCDVEMNTQ GAYGRLLEE 219
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-K0EWE2-F1-model_v4 | 3 | 217 | 1 | 244 | 0.8012 |
0.8889 |
| AF-Q9CCN0-F1-model_v4 | 3 | 218 | 1 | 244 | 0.7802 |
0.8874 |
| AF-P9WHI5-F1-model_v4 | 3 | 217 | 1 | 244 | 0.7789 |
0.8861 |
| AF-A0A132Z1J9-F1-model_v4 | 2 | 219 | 1 | 251 | 0.7706 |
0.8765 |
| AF-Q8DRN4-F1-model_v4 | 2 | 219 | 1 | 249 | 0.7704 |
0.858 |
| AF-Q2FY07-F1-model_v4 | 6 | 219 | 1 | 248 | 0.7518 |
0.8415 |
| AF-Q9XCX7-F1-model_v4 | 3 | 219 | 1 | 229 | 0.7332 |
0.7893 |
| AF-P44642-F1-model_v4 | 4 | 219 | 1 | 236 | 0.7302 |
0.7933 |
| AF-P0A285-F1-model_v4 | 4 | 219 | 1 | 235 | 0.7264 |
0.7971 |
| AF-Q9ZHY2-F1-model_v4 | 2 | 219 | 2 | 244 | 0.7251 |
0.7975 |
Structural Homologs - CAZyme3D-Whole
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - CAZyme-ID50
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 1u5k-assembly1.cif.gz_A | 2 | 219 | 1 | 240 | 0.7773 |
0.8458 |
| 2v1c-assembly1.cif.gz_C-2 | 3 | 213 | 1 | 229 | 0.7719 |
0.8429 |
| 1w3s-assembly1.cif.gz_A | 3 | 214 | 2 | 230 | 0.7704 |
0.8394 |
| 1u5k-assembly1.cif.gz_B | 3 | 214 | 3 | 232 | 0.7693 |
0.8417 |
| 4jcv-assembly1.cif.gz_E | 3 | 205 | 1 | 214 | 0.7379 |
0.8102 |
| 4jcv-assembly1.cif.gz_F | 5 | 205 | 1 | 213 | 0.7353 |
0.813 |
| 3q8d-assembly1.cif.gz_A | 5 | 219 | 1 | 231 | 0.7286 |
0.7883 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q97JI4-F1-model_v4 | 3 | 219 | 1 | 247 | 0.8194 |
0.8982 |
| AF-Q3AEY5-F1-model_v4 | 3 | 212 | 1 | 240 | 0.8169 |
0.9082 |
| AF-Q67RZ0-F1-model_v4 | 3 | 219 | 1 | 253 | 0.8155 |
0.902 |
| AF-A5D3W7-F1-model_v4 | 3 | 219 | 1 | 248 | 0.8155 |
0.9063 |
| AF-Q2JDJ2-F1-model_v4 | 3 | 217 | 1 | 243 | 0.8145 |
0.8924 |
| AF-Q47RM7-F1-model_v4 | 3 | 217 | 1 | 243 | 0.814 |
0.892 |
| AF-A6TSJ6-F1-model_v4 | 4 | 219 | 1 | 246 | 0.8111 |
0.89 |
| AF-C5C4P4-F1-model_v4 | 3 | 217 | 1 | 243 | 0.8096 |
0.8879 |
| AF-B1I1S7-F1-model_v4 | 3 | 218 | 1 | 248 | 0.8094 |
0.8939 |
| AF-B8DSY8-F1-model_v4 | 3 | 215 | 1 | 239 | 0.8082 |
0.8869 |