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Cluster: HRGMv2_4784_CGC22

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4784_25 HRGMv2_4784_25_1 38 787 - 3.A.1.7.5
TC HRGMv2_4784_25 HRGMv2_4784_25_2 784 1611 - 3.A.1.7.5
TC HRGMv2_4784_25 HRGMv2_4784_25_3 1608 2465 - 3.A.1.7.5
pfam HRGMv2_4784_25 HRGMv2_4784_25_4 2533 3420 - PBP_like_2 | PBP_like_2
TC HRGMv2_4784_25 HRGMv2_4784_25_5 3630 5036 + 9.B.18.1.3
NULL(UNKNOWN) HRGMv2_4784_25 HRGMv2_4784_25_6 5033 6541 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_4784_25 HRGMv2_4784_25_7 6542 7339 + GT2
CAZyme HRGMv2_4784_25 HRGMv2_4784_25_8 7463 8641 - GT4
Gene ID: HRGMv2_4784_25_1
Type: TC
Location: 38 - 787 (-)
Gene ID: HRGMv2_4784_25_2
Type: TC
Location: 784 - 1611 (-)
Gene ID: HRGMv2_4784_25_3
Type: TC
Location: 1608 - 2465 (-)
Gene ID: HRGMv2_4784_25_4
Type: pfam
Location: 2533 - 3420 (-)
Gene ID: HRGMv2_4784_25_5
Type: TC
Location: 3630 - 5036 (+)
Gene ID: HRGMv2_4784_25_6
Type:
Location: 5033 - 6541 (+)
Gene ID: HRGMv2_4784_25_7
Type: CAZyme
Location: 6542 - 7339 (+)
Gene ID: HRGMv2_4784_25_8
Type: CAZyme
Location: 7463 - 8641 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
UMGS1810
→
Family
UMGS1810
→
Genus
JAJXRJ01
→
Species
JAJXRJ01 sp021629085

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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