PROTEIN: HRGMv2_4784_25_6
Loading protein structure...
Loading protein structure...
Protein File & Metadata
Source:
HRGMv2_4784_25_6.pdb
Genome ID:
Protein ID:
HRGMv2_4784_25_6
Loading protein structure information...
Detailed structural information will appear here after analysis...
Protein Sequence
MKKESALNLS INILSFALSM GLSFWITPFI VHSLGEASYS FVPTTYQIVS YMSVITVSVT 60 AISGRFFTIS KTRGDQQTAQ AYFSSTLAAT LLLSAVLLIP LALSNLFLHQ ILNIPPALLS 120 QVRLAHGIAC AVFLVTFFTA SFNIAPFAAN KLYLTGSINI VQTVVRTFAT FVVCVAFVPS 180 IPLVMLCYLV AAVCMLALSV VVFKRLEPTV KITPRGATKT KEMLSSGMWA SLSEIGVILF 240 LQIDLFVANR TLSPFDAGQY AVVLQLPTLL RSFASAVTSI FTPVVVSLYA QKKITQTISY 300 INRAVKYTGL LLSLPIGILC GLGATFLSLW IGPSYRSQQM ILAVLTLHLA INLPVQIIMS 360 IQTAQNKLKI PAFATVILGA LNFAAAYVLA GPCKMGALGI AISGSVVLTL KNLVFTPLYA 420 AHITNQPWYA YLPGILKPLF STAAVAALCL YLQSALHIEH FFSFFGVCIV VSVIYFAAVW 480 LFLLEKQERQ SCLAFLKERV GK 502
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-H9L497-F1-model_v4 | 1 | 501 | 3 | 485 | 0.8838 |
0.9216 |
| AF-Q2G262-F1-model_v4 | 1 | 501 | 2 | 476 | 0.8818 |
0.9202 |
| AF-P77377-F1-model_v4 | 1 | 501 | 3 | 485 | 0.8784 |
0.9164 |
| AF-A0A0H3GSJ3-F1-model_v4 | 3 | 501 | 1 | 478 | 0.8686 |
0.9044 |
| AF-Q58467-F1-model_v4 | 1 | 499 | 2 | 507 | 0.8658 |
0.892 |
| AF-Q32ET1-F1-model_v4 | 2 | 498 | 1 | 511 | 0.8564 |
0.888 |
| AF-P0AF16-F1-model_v4 | 2 | 498 | 1 | 511 | 0.8541 |
0.8859 |
| AF-P37169-F1-model_v4 | 1 | 498 | 12 | 524 | 0.8499 |
0.8898 |
| AF-A0A0H3GRG5-F1-model_v4 | 2 | 498 | 1 | 511 | 0.846 |
0.8788 |
| AF-Q8DPI1-F1-model_v4 | 1 | 502 | 3 | 492 | 0.8459 |
0.8783 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A160T089-F1-model_v4 | GT4 | 1 | 502 | 3 | 512 | 0.8669 |
0.8931 |
| AF-A0A160T2N7-F1-model_v4 | GT28 | 1 | 499 | 39 | 545 | 0.8263 |
0.8792 |
| QNU38870.1 | GT4 | 2 | 502 | 1 | 479 | 0.7715 |
0.8916 |
| QJC17489.1 | GT2 | 1 | 502 | 341 | 846 | 0.7675 |
0.968 |
| AF-A0A3Q9G719-F1-model_v4 | GT4 | 2 | 502 | 1 | 589 | 0.6855 |
0.8882 |
| AF-D1BIF1-F1-model_v4 | GT4 | 1 | 502 | 8 | 654 | 0.6805 |
0.899 |
| AF-A0A3T0RPT8-F1-model_v4 | GT4 | 2 | 501 | 3 | 586 | 0.6805 |
0.8642 |
| AF-A0A517Z2I8-F1-model_v4 | GT2 | 1 | 502 | 8 | 756 | 0.6795 |
0.8691 |
| AF-A0A6P1FQ34-F1-model_v4 | GT4 | 1 | 502 | 3 | 488 | 0.6765 |
0.8946 |
| AF-A0A2U8PPB3-F1-model_v4 | GT4 | 1 | 502 | 1 | 566 | 0.6761 |
0.8506 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A160T089 | GT4 | 1 | 502 | 3 | 512 | 0.8669 |
0.8931 |
| A0A160T2N7 | GT28 | 1 | 499 | 39 | 545 | 0.8263 |
0.8792 |
| QNU38870.1 | GT4 | 2 | 502 | 1 | 479 | 0.7715 |
0.8916 |
| QJC17489.1 | GT2 | 1 | 502 | 341 | 846 | 0.7675 |
0.968 |
| A0A3Q9G719 | GT4 | 2 | 502 | 1 | 589 | 0.6855 |
0.8882 |
| D1BIF1 | GT4 | 1 | 502 | 8 | 654 | 0.6805 |
0.899 |
| A0A3T0RPT8 | GT4 | 2 | 501 | 3 | 586 | 0.6805 |
0.8642 |
| A0A517Z2I8 | GT2 | 1 | 502 | 8 | 756 | 0.6795 |
0.8691 |
| A0A2U8PPB3 | GT4 | 1 | 502 | 1 | 566 | 0.6761 |
0.8506 |
| A0A0C5BEZ8 | GT4 | 3 | 502 | 1 | 588 | 0.676 |
0.8745 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 7waw-assembly1.cif.gz_A | 10 | 492 | 1 | 496 | 0.8414 |
0.8842 |
| 6nc6-assembly2.cif.gz_B | 6 | 490 | 1 | 461 | 0.8198 |
0.8711 |
| 6cc4-assembly1.cif.gz_A | 1 | 496 | 44 | 608 | 0.7869 |
0.8832 |
| 6fhz-assembly1.cif.gz_A | 6 | 428 | 8 | 437 | 0.7768 |
0.8741 |
| 5y50-assembly1.cif.gz_A | 1 | 425 | 5 | 436 | 0.6841 |
0.7798 |
| 6hfb-assembly3.cif.gz_C | 2 | 426 | 4 | 447 | 0.6767 |
0.7739 |
| 5xjj-assembly1.cif.gz_A | 1 | 425 | 6 | 437 | 0.6715 |
0.7659 |
| 3wbn-assembly1.cif.gz_A | 2 | 426 | 2 | 446 | 0.6715 |
0.7672 |
| 6z70-assembly1.cif.gz_A | 1 | 425 | 14 | 438 | 0.6646 |
0.7543 |
| 6ids-assembly1.cif.gz_A | 1 | 425 | 6 | 428 | 0.6646 |
0.7525 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P71060-F1-model_v4 | 3 | 502 | 1 | 502 | 0.9601 |
0.9737 |
| AF-Q48457-F1-model_v4 | 1 | 502 | 3 | 485 | 0.8862 |
0.919 |
| AF-P77377-F1-model_v4 | 1 | 501 | 3 | 485 | 0.8784 |
0.9164 |
| AF-P33699-F1-model_v4 | 1 | 502 | 6 | 486 | 0.8705 |
0.9142 |
| AF-Q58467-F1-model_v4 | 1 | 499 | 2 | 507 | 0.8658 |
0.892 |
| AF-D4GU68-F1-model_v4 | 2 | 501 | 1 | 472 | 0.8544 |
0.8969 |
| AF-P0AF16-F1-model_v4 | 2 | 498 | 1 | 511 | 0.8541 |
0.8859 |
| AF-O32273-F1-model_v4 | 1 | 502 | 2 | 483 | 0.8539 |
0.889 |
| AF-P37169-F1-model_v4 | 1 | 498 | 12 | 524 | 0.8499 |
0.8898 |
| AF-O34238-F1-model_v4 | 1 | 495 | 6 | 525 | 0.849 |
0.8944 |