Cluster: HRGMv2_4775_CGC9
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4775
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4775_5 | HRGMv2_4775_5_70 | 67186 | 67527 | - | 2.A.7.33.5 |
| pfam | HRGMv2_4775_5 | HRGMv2_4775_5_71 | 67517 | 67903 | - | EamA |
| CAZyme | HRGMv2_4775_5 | HRGMv2_4775_5_72 | 67896 | 68813 | - | GT2 |
Gene ID: HRGMv2_4775_5_70
Type: TC
Location: 67186 - 67527 (-)
Type: TC
Location: 67186 - 67527 (-)
Gene ID: HRGMv2_4775_5_71
Type: pfam
Location: 67517 - 67903 (-)
Type: pfam
Location: 67517 - 67903 (-)
Gene ID: HRGMv2_4775_5_72
Type: CAZyme
Location: 67896 - 68813 (-)
Type: CAZyme
Location: 67896 - 68813 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema_D
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.