Cluster: HRGMv2_4775_CGC6
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4775
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4775_4 | HRGMv2_4775_4_45 | 45398 | 46138 | - | GT26 |
| pfam | HRGMv2_4775_4 | HRGMv2_4775_4_46 | 46120 | 46956 | - | Methyltrans_RNA |
| TC | HRGMv2_4775_4 | HRGMv2_4775_4_47 | 46956 | 48467 | - | 9.B.174.1.1 |
Gene ID: HRGMv2_4775_4_45
Type: CAZyme
Location: 45398 - 46138 (-)
Type: CAZyme
Location: 45398 - 46138 (-)
Gene ID: HRGMv2_4775_4_46
Type: pfam
Location: 46120 - 46956 (-)
Type: pfam
Location: 46120 - 46956 (-)
Gene ID: HRGMv2_4775_4_47
Type: TC
Location: 46956 - 48467 (-)
Type: TC
Location: 46956 - 48467 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema_D
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.