Cluster: HRGMv2_4775_CGC14
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4775
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4775_14 | HRGMv2_4775_14_30 | 37395 | 38501 | + | 3.A.1.5.29 |
| TC | HRGMv2_4775_14 | HRGMv2_4775_14_31 | 38508 | 40481 | + | 3.A.1.5.29 |
| CAZyme | HRGMv2_4775_14 | HRGMv2_4775_14_32 | 40733 | 42331 | + | GH77 |
Gene ID: HRGMv2_4775_14_30
Type: TC
Location: 37395 - 38501 (+)
Type: TC
Location: 37395 - 38501 (+)
Gene ID: HRGMv2_4775_14_31
Type: TC
Location: 38508 - 40481 (+)
Type: TC
Location: 38508 - 40481 (+)
Gene ID: HRGMv2_4775_14_32
Type: CAZyme
Location: 40733 - 42331 (+)
Type: CAZyme
Location: 40733 - 42331 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema_D
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.