dbCAN Logo

Cluster: HRGMv2_4775_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4775_10 HRGMv2_4775_10_3 2432 3184 + 2.A.88.8.7
pfam HRGMv2_4775_10 HRGMv2_4775_10_4 3194 3874 + adh_short | Epimerase | adh_short_C2
TC HRGMv2_4775_10 HRGMv2_4775_10_5 3899 4312 + 2.A.7.2.1
pfam HRGMv2_4775_10 HRGMv2_4775_10_6 4329 4940 + Acetyltransf_1 | Acetyltransf_4 | Acetyltransf_7 | Acetyltransf_10
TC HRGMv2_4775_10 HRGMv2_4775_10_7 5050 5997 + 3.A.1.34.1
TC HRGMv2_4775_10 HRGMv2_4775_10_8 6165 7196 + 3.A.1.34.1
TC HRGMv2_4775_10 HRGMv2_4775_10_9 7220 8005 + 3.A.1.34.1
NULL(UNKNOWN) HRGMv2_4775_10 HRGMv2_4775_10_10 8053 10695 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_4775_10 HRGMv2_4775_10_11 10713 11816 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_4775_10 HRGMv2_4775_10_12 11901 14282 - GT51
Gene ID: HRGMv2_4775_10_3
Type: TC
Location: 2432 - 3184 (+)
Gene ID: HRGMv2_4775_10_4
Type: pfam
Location: 3194 - 3874 (+)
Gene ID: HRGMv2_4775_10_5
Type: TC
Location: 3899 - 4312 (+)
Gene ID: HRGMv2_4775_10_6
Type: pfam
Location: 4329 - 4940 (+)
Gene ID: HRGMv2_4775_10_7
Type: TC
Location: 5050 - 5997 (+)
Gene ID: HRGMv2_4775_10_8
Type: TC
Location: 6165 - 7196 (+)
Gene ID: HRGMv2_4775_10_9
Type: TC
Location: 7220 - 8005 (+)
Gene ID: HRGMv2_4775_10_10
Type:
Location: 8053 - 10695 (+)
Gene ID: HRGMv2_4775_10_11
Type:
Location: 10713 - 11816 (+)
Gene ID: HRGMv2_4775_10_12
Type: CAZyme
Location: 11901 - 14282 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Spirochaetota
→
Class
Spirochaetia
→
Order
Treponematales
→
Family
Treponemataceae
→
Genus
Treponema_D
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List