Cluster: HRGMv2_4774_CGC4
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4774
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4774_9 | HRGMv2_4774_9_19 | 27623 | 29134 | + | 9.B.174.1.1 |
| pfam | HRGMv2_4774_9 | HRGMv2_4774_9_20 | 29147 | 29983 | + | Methyltrans_RNA |
| CAZyme | HRGMv2_4774_9 | HRGMv2_4774_9_21 | 29965 | 30705 | + | GT26 |
Gene ID: HRGMv2_4774_9_19
Type: TC
Location: 27623 - 29134 (+)
Type: TC
Location: 27623 - 29134 (+)
Gene ID: HRGMv2_4774_9_20
Type: pfam
Location: 29147 - 29983 (+)
Type: pfam
Location: 29147 - 29983 (+)
Gene ID: HRGMv2_4774_9_21
Type: CAZyme
Location: 29965 - 30705 (+)
Type: CAZyme
Location: 29965 - 30705 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema_D
Species
Treponema_D sp002437725
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.