Cluster: HRGMv2_4751_CGC4
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 7
- Substrate:
- Genome ID: HRGMv2_4751
- CGC Family ID: CGCFAM_00009
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4751_4 | HRGMv2_4751_4_70 | 67856 | 68848 | + | GT2 |
| TC | HRGMv2_4751_4 | HRGMv2_4751_4_71 | 68871 | 70184 | + | 3.A.1.103.6 |
| pfam | HRGMv2_4751_4 | HRGMv2_4751_4_72 | 70203 | 71324 | + | RrnaAD | TehB | NodS | Methyltransf_11 | Methyltransf_12 | Methyltransf_23 | Methyltransf_25 | Methyltransf_31 |
| NULL(UNKNOWN) | HRGMv2_4751_4 | HRGMv2_4751_4_73 | 71365 | 72882 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_4751_4 | HRGMv2_4751_4_74 | 72904 | 74808 | + | GT2 | GT2 |
| pfam | HRGMv2_4751_4 | HRGMv2_4751_4_75 | 74827 | 76545 | + | DUF2142 |
| CAZyme | HRGMv2_4751_4 | HRGMv2_4751_4_76 | 76572 | 77264 | + | GT2 |
| pfam | HRGMv2_4751_4 | HRGMv2_4751_4_77 | 77294 | 77629 | + | DUF2304 |
| CAZyme | HRGMv2_4751_4 | HRGMv2_4751_4_78 | 77652 | 78701 | + | GT2 |
| CAZyme | HRGMv2_4751_4 | HRGMv2_4751_4_79 | 78719 | 79636 | + | GT2 |
| NULL(UNKNOWN) | HRGMv2_4751_4 | HRGMv2_4751_4_80 | 79650 | 80894 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_4751_4 | HRGMv2_4751_4_81 | 80947 | 83052 | + | GH25 |
| pfam | HRGMv2_4751_4 | HRGMv2_4751_4_82 | 83068 | 83502 | + | GtrA_DPMS_TM |
| NULL(UNKNOWN) | HRGMv2_4751_4 | HRGMv2_4751_4_83 | 83492 | 85063 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_4751_4 | HRGMv2_4751_4_84 | 85065 | 86006 | + | GT2 |
Gene ID: HRGMv2_4751_4_70
Type: CAZyme
Location: 67856 - 68848 (+)
Type: CAZyme
Location: 67856 - 68848 (+)
Gene ID: HRGMv2_4751_4_71
Type: TC
Location: 68871 - 70184 (+)
Type: TC
Location: 68871 - 70184 (+)
Gene ID: HRGMv2_4751_4_72
Type: pfam
Location: 70203 - 71324 (+)
Type: pfam
Location: 70203 - 71324 (+)
Gene ID: HRGMv2_4751_4_73
Type:
Location: 71365 - 72882 (+)
Type:
Location: 71365 - 72882 (+)
Gene ID: HRGMv2_4751_4_74
Type: CAZyme
Location: 72904 - 74808 (+)
Type: CAZyme
Location: 72904 - 74808 (+)
Gene ID: HRGMv2_4751_4_75
Type: pfam
Location: 74827 - 76545 (+)
Type: pfam
Location: 74827 - 76545 (+)
Gene ID: HRGMv2_4751_4_76
Type: CAZyme
Location: 76572 - 77264 (+)
Type: CAZyme
Location: 76572 - 77264 (+)
Gene ID: HRGMv2_4751_4_77
Type: pfam
Location: 77294 - 77629 (+)
Type: pfam
Location: 77294 - 77629 (+)
Gene ID: HRGMv2_4751_4_78
Type: CAZyme
Location: 77652 - 78701 (+)
Type: CAZyme
Location: 77652 - 78701 (+)
Gene ID: HRGMv2_4751_4_79
Type: CAZyme
Location: 78719 - 79636 (+)
Type: CAZyme
Location: 78719 - 79636 (+)
Gene ID: HRGMv2_4751_4_80
Type:
Location: 79650 - 80894 (+)
Type:
Location: 79650 - 80894 (+)
Gene ID: HRGMv2_4751_4_81
Type: CAZyme
Location: 80947 - 83052 (+)
Type: CAZyme
Location: 80947 - 83052 (+)
Gene ID: HRGMv2_4751_4_82
Type: pfam
Location: 83068 - 83502 (+)
Type: pfam
Location: 83068 - 83502 (+)
Gene ID: HRGMv2_4751_4_83
Type:
Location: 83492 - 85063 (+)
Type:
Location: 83492 - 85063 (+)
Gene ID: HRGMv2_4751_4_84
Type: CAZyme
Location: 85065 - 86006 (+)
Type: CAZyme
Location: 85065 - 86006 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
TANB77
Family
CAG-508
Genus
CAG-269
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.