PROTEIN: HRGMv2_4751_4_80
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Protein File & Metadata
Source:
HRGMv2_4751_4_80.pdb
Genome ID:
Protein ID:
HRGMv2_4751_4_80
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Protein Sequence
MIKKSEFIWN TIGSIISSIL NAILLLFCTR INGTEVAGMF SISFATAIIL NAIGDFGIRI 60 YQVTDTKKKY KFEDYLLSRI FVVSIMFIIG LLFVIISGYT IEKMMICILL ILFKVIDNLS 120 ETYQAEFQIN GRLDIGGKSI VIRNCIAMIT FLIVDILTHN IVLACLGLFI SNAVLFILYD 180 KTKIKQFVNI NKNLNKDTIK NIIKECLPLA ISTLLSMYIT NAVKYSIDIC GNYEMQTYFN 240 IIYLPTFTIN LVSLLVIKPI LKPLGDSWNS NDKKGFMKIL LKLSAIILVA TVLIEIICAS 300 IAIPVLSIIY GVDLSMYKIE LMILVISGFF YAMATLVFYA LSTMRRQKQT TIAYIITSVF 360 SLIIPYILVK KYGMMGTAIS NLLITIVLFL ILTIFCLMAY KKQFPQIAKT KSID 414
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P71399-F1-model_v4 | 1 | 403 | 1 | 401 | 0.8565 |
0.8885 |
| AF-P26400-F1-model_v4 | 1 | 406 | 9 | 430 | 0.8447 |
0.8945 |
| AF-P37746-F1-model_v4 | 1 | 406 | 6 | 415 | 0.8407 |
0.8779 |
| AF-Q2G1J8-F1-model_v4 | 1 | 407 | 2 | 400 | 0.8375 |
0.8754 |
| AF-P0AAA7-F1-model_v4 | 1 | 404 | 1 | 416 | 0.8187 |
0.8624 |
| AF-G3XD19-F1-model_v4 | 1 | 406 | 2 | 411 | 0.8175 |
0.8536 |
| AF-Q32EG2-F1-model_v4 | 3 | 397 | 3 | 396 | 0.8168 |
0.8599 |
| AF-Q57484-F1-model_v4 | 1 | 407 | 1 | 404 | 0.8165 |
0.8498 |
| AF-Q58770-F1-model_v4 | 1 | 404 | 1 | 415 | 0.814 |
0.8562 |
| AF-P9WKX9-F1-model_v4 | 1 | 401 | 26 | 431 | 0.8132 |
0.8728 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A160T089-F1-model_v4 | GT4 | 1 | 403 | 4 | 437 | 0.779 |
0.8978 |
| QNU38870.1 | GT4 | 1 | 402 | 1 | 408 | 0.7137 |
0.8797 |
| AF-A0A248VQW5-F1-model_v4 | GT2 | 1 | 412 | 3 | 564 | 0.685 |
0.8788 |
| B1FZW0 | GT2 | 1 | 407 | 3 | 431 | 0.684 |
0.8874 |
| AF-A0A345VG16-F1-model_v4 | GT2 | 1 | 414 | 271 | 694 | 0.6782 |
0.858 |
| A0A836MCF6 | GT100 | 1 | 414 | 1 | 452 | 0.6766 |
0.8622 |
| AF-A0A5B8KBR4-F1-model_v4 | GT2 | 1 | 405 | 272 | 682 | 0.6627 |
0.8576 |
| AF-A0A1P8M2V1-F1-model_v4 | GT2 | 1 | 405 | 277 | 687 | 0.6614 |
0.8581 |
| A0A2W1ZQY8 | GT4 | 1 | 414 | 1 | 440 | 0.6547 |
0.8742 |
| A0A543Z557 | GH16_5 | 1 | 404 | 5 | 437 | 0.6534 |
0.8638 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A160T089 | GT4 | 1 | 403 | 4 | 437 | 0.779 |
0.8978 |
| QNU38870.1 | GT4 | 1 | 402 | 1 | 408 | 0.7137 |
0.8797 |
| B1FZW0 | GT2 | 1 | 407 | 3 | 431 | 0.684 |
0.8874 |
| A0A836MCF6 | GT100 | 1 | 414 | 1 | 452 | 0.6766 |
0.8622 |
| A0A2W1ZQY8 | GT4 | 1 | 414 | 1 | 440 | 0.6547 |
0.8742 |
| A0A543Z557 | GH16_5 | 1 | 404 | 5 | 437 | 0.6534 |
0.8638 |
| A0A0J6W0G8 | GH16_3 | 1 | 411 | 20 | 436 | 0.6525 |
0.8353 |
| A0A1V0ABA3 | GT4 | 1 | 410 | 384 | 793 | 0.6524 |
0.8716 |
| A0A975FPH4 | GT4 | 2 | 414 | 1 | 574 | 0.6496 |
0.8553 |
| A0A2U8PPB3 | GT4 | 1 | 401 | 1 | 404 | 0.6489 |
0.8997 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 6fhz-assembly1.cif.gz_A | 8 | 408 | 11 | 440 | 0.813 |
0.8816 |
| 7waw-assembly1.cif.gz_A | 7 | 404 | 1 | 429 | 0.7448 |
0.858 |
| 6nc6-assembly2.cif.gz_B | 4 | 398 | 1 | 405 | 0.7395 |
0.8321 |
| 5y50-assembly1.cif.gz_A | 1 | 403 | 8 | 438 | 0.7088 |
0.7798 |
| 6gwh-assembly1.cif.gz_A | 1 | 405 | 3 | 438 | 0.6913 |
0.7544 |
| 3wbn-assembly1.cif.gz_A | 1 | 405 | 3 | 449 | 0.6906 |
0.7605 |
| 4mlb-assembly1.cif.gz_C | 1 | 405 | 4 | 451 | 0.6897 |
0.7607 |
| 6hfb-assembly3.cif.gz_C | 1 | 405 | 5 | 450 | 0.6885 |
0.7588 |
| 6z70-assembly1.cif.gz_A | 1 | 404 | 4 | 441 | 0.6857 |
0.7512 |
| 3w4t-assembly1.cif.gz_A | 1 | 405 | 4 | 445 | 0.6799 |
0.7473 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P39855-F1-model_v4 | 1 | 404 | 1 | 396 | 0.8995 |
0.9335 |
| AF-P71399-F1-model_v4 | 1 | 403 | 1 | 401 | 0.8565 |
0.8885 |
| AF-Q05347-F1-model_v4 | 1 | 408 | 4 | 434 | 0.8515 |
0.9032 |
| AF-Q99191-F1-model_v4 | 1 | 404 | 10 | 432 | 0.8493 |
0.9044 |
| AF-P26400-F1-model_v4 | 1 | 406 | 9 | 430 | 0.8447 |
0.8945 |
| AF-P37746-F1-model_v4 | 1 | 406 | 6 | 415 | 0.8407 |
0.8779 |
| AF-Q45411-F1-model_v4 | 1 | 405 | 12 | 430 | 0.8313 |
0.8892 |
| AF-P37781-F1-model_v4 | 1 | 406 | 1 | 418 | 0.831 |
0.8719 |
| AF-Q9CNC5-F1-model_v4 | 1 | 405 | 1 | 399 | 0.8304 |
0.8668 |
| AF-P0AAA7-F1-model_v4 | 1 | 404 | 1 | 416 | 0.8187 |
0.8624 |