Cluster: HRGMv2_4709_CGC16
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4709
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4709_16 | HRGMv2_4709_16_38 | 36183 | 37016 | - | CE11 |
| NULL(UNKNOWN) | HRGMv2_4709_16 | HRGMv2_4709_16_39 | 37141 | 38100 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_4709_16 | HRGMv2_4709_16_40 | 38128 | 38940 | - | 3.A.1.3.27 |
| STP | HRGMv2_4709_16 | HRGMv2_4709_16_41 | 39187 | 40251 | + | HD |
| TC | HRGMv2_4709_16 | HRGMv2_4709_16_42 | 40320 | 41537 | - | 3.A.1.122.2 |
| TC | HRGMv2_4709_16 | HRGMv2_4709_16_43 | 41527 | 42246 | - | 3.A.1.122.2 |
| TC | HRGMv2_4709_16 | HRGMv2_4709_16_44 | 42296 | 43432 | - | 3.A.1.122.1 |
Gene ID: HRGMv2_4709_16_38
Type: CAZyme
Location: 36183 - 37016 (-)
Type: CAZyme
Location: 36183 - 37016 (-)
Gene ID: HRGMv2_4709_16_39
Type:
Location: 37141 - 38100 (-)
Type:
Location: 37141 - 38100 (-)
Gene ID: HRGMv2_4709_16_40
Type: TC
Location: 38128 - 38940 (-)
Type: TC
Location: 38128 - 38940 (-)
Gene ID: HRGMv2_4709_16_41
Type: STP
Location: 39187 - 40251 (+)
Type: STP
Location: 39187 - 40251 (+)
Gene ID: HRGMv2_4709_16_42
Type: TC
Location: 40320 - 41537 (-)
Type: TC
Location: 40320 - 41537 (-)
Gene ID: HRGMv2_4709_16_43
Type: TC
Location: 41527 - 42246 (-)
Type: TC
Location: 41527 - 42246 (-)
Gene ID: HRGMv2_4709_16_44
Type: TC
Location: 42296 - 43432 (-)
Type: TC
Location: 42296 - 43432 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Selenomonadales
Family
Selenomonadaceae
Genus
UBA2897
Species
UBA2897 sp022773425
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.