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PROTEIN: HRGMv2_4709_16_39

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Protein File & Metadata
Download PDB File
Source:
HRGMv2_4709_16_39.pdb
Genome ID:
HRGMv2_4709
Protein ID:
HRGMv2_4709_16_39

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Detailed structural information will appear here after analysis...

Protein Sequence 
MSDKITSGIQ   ELAGKILDDY   EQERPIDKLD   VFNQPRLDII   CALTDKLCRI   AFPGYTKDPE 60
YRIYDIRANM   QMVIEDVAFN   LNKQIAIALR   YGQKLTAKER   MEAGSRAQDI   TMEFLRRIPR 120
VRAYIATDLD   ATFDGDPAAE   SLDEIIFSYP   GLYAITVYRF   AHELYELKVP   VIPRVMTERA 180
HSKTGIDINP   GATIGKYFFI   DHGTGIVIGE   TTHIGDHVKV   YQGVTLGALS   TSGGRALHNV 240
RRHPTIEDNV   TIYSGASILG   GNTVIGKGSV   IGGNVFLTKS   VAPGTKVSVK   NQELRYNTGS 300
KKVQEVKDDA   DNAAWFYVI 319
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-Q4DJX5-F1-model_v4 1 303 1 339 0.8067 0.8965
AF-Q4D6P5-F1-model_v4 1 295 1 334 0.7981 0.9017
AF-A4IA64-F1-model_v4 4 317 1 411 0.753 0.8697
AF-P71405-F1-model_v4 120 290 1 162 0.7041 0.9755
AF-Q9I210-F1-model_v4 42 308 2 219 0.6946 0.8625
AF-A0A132Z2H2-F1-model_v4 122 290 1 162 0.683 0.9703
AF-A0A077ZMK0-F1-model_v4 122 290 1 162 0.6802 0.9633
AF-Q2G2M7-F1-model_v4 119 294 1 185 0.6293 0.9226
AF-Q0PAC7-F1-model_v4 119 311 1 175 0.6276 0.9168
AF-Q8DQS9-F1-model_v4 122 310 1 173 0.6233 0.9039
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A447LR74-F1-model_v4 GT2 51 290 16 227 0.5361 0.6903
BCS39092.1 GT4 119 302 191 373 0.4454 0.8225
AF-A0A0K1Q0U6-F1-model_v4 GT2 83 309 261 562 0.4433 0.7792
AF-A0A250IU01-F1-model_v4 GT2 81 313 266 531 0.4307 0.7248
AF-A0A250IFU7-F1-model_v4 GT2 71 313 257 530 0.4098 0.666
AF-K9T6P7-F1-model_v4 GT2 118 319 331 508 0.3772 0.8068
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A447LR74 GT2 51 290 16 227 0.5361 0.6903
BCS39092.1 GT4 119 302 191 373 0.4454 0.8225
A0A0K1Q0U6 GT2 83 309 261 562 0.4433 0.7792
A0A250IU01 GT2 81 313 266 531 0.4307 0.7248
K9T6P7 GT2 118 319 331 508 0.3772 0.8068
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
6lcn-assembly1.cif.gz_E 2 300 1 294 0.8785 0.9254
6lcn-assembly1.cif.gz_A 3 299 1 296 0.8776 0.9216
6lcn-assembly1.cif.gz_C 6 300 1 294 0.8763 0.9229
6lcn-assembly1.cif.gz_B 1 300 11 306 0.8642 0.9233
6lcn-assembly1.cif.gz_F 1 300 14 309 0.8638 0.9265
3f1x-assembly1.cif.gz_A 1 293 1 276 0.8608 0.9341
3p1b-assembly1.cif.gz_A 40 289 35 266 0.754 0.9488
3p47-assembly1.cif.gz_A-2 40 289 36 270 0.7498 0.9397
7bw9-assembly1.cif.gz_B 40 299 34 267 0.7472 0.951
7bw9-assembly1.cif.gz_A 40 298 34 269 0.7443 0.9462
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-Q59967-F1-model_v4 1 301 11 314 0.8549 0.9157
AF-Q9ZK14-F1-model_v4 120 290 1 162 0.7044 0.976
AF-P71405-F1-model_v4 120 290 1 162 0.7041 0.9755
AF-Q6GBV9-F1-model_v4 119 294 1 185 0.6327 0.9264
AF-Q5HRM4-F1-model_v4 121 316 1 184 0.6313 0.8814
AF-Q6GJE0-F1-model_v4 119 294 1 185 0.6302 0.924
AF-P67764-F1-model_v4 121 294 1 183 0.6301 0.9293
AF-P67765-F1-model_v4 121 294 1 183 0.6284 0.9267
AF-P67766-F1-model_v4 121 310 1 183 0.6281 0.8816
AF-Q8CTU2-F1-model_v4 121 310 1 182 0.6268 0.8833
Download Full SwissProt Results