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Cluster: HRGMv2_4697_CGC53

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4697_26 HRGMv2_4697_26_1 59 1693 + 3.A.1.5.4
TC HRGMv2_4697_26 HRGMv2_4697_26_2 1803 2801 + 3.A.1.5.22
TC HRGMv2_4697_26 HRGMv2_4697_26_3 2802 3788 + 3.A.1.5.34
TC HRGMv2_4697_26 HRGMv2_4697_26_4 3799 4725 + 3.A.1.5.4
TC HRGMv2_4697_26 HRGMv2_4697_26_5 4736 5617 + 3.A.1.5.4
pfam HRGMv2_4697_26 HRGMv2_4697_26_6 5649 6398 + GDPD
NULL(UNKNOWN) HRGMv2_4697_26 HRGMv2_4697_26_7 6434 6544 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_4697_26 HRGMv2_4697_26_8 6570 8954 - GT51
Gene ID: HRGMv2_4697_26_1
Type: TC
Location: 59 - 1693 (+)
Gene ID: HRGMv2_4697_26_2
Type: TC
Location: 1803 - 2801 (+)
Gene ID: HRGMv2_4697_26_3
Type: TC
Location: 2802 - 3788 (+)
Gene ID: HRGMv2_4697_26_4
Type: TC
Location: 3799 - 4725 (+)
Gene ID: HRGMv2_4697_26_5
Type: TC
Location: 4736 - 5617 (+)
Gene ID: HRGMv2_4697_26_6
Type: pfam
Location: 5649 - 6398 (+)
Gene ID: HRGMv2_4697_26_7
Type:
Location: 6434 - 6544 (+)
Gene ID: HRGMv2_4697_26_8
Type: CAZyme
Location: 6570 - 8954 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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