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Cluster: HRGMv2_4697_CGC51

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4697_23 HRGMv2_4697_23_15 16401 17180 - 3.A.1.5.11
TC HRGMv2_4697_23 HRGMv2_4697_23_16 17177 17977 - 3.A.1.5.35
TC HRGMv2_4697_23 HRGMv2_4697_23_17 17974 18804 - 3.A.1.5.20
TC HRGMv2_4697_23 HRGMv2_4697_23_18 18801 19790 - 3.A.1.5.4
TC HRGMv2_4697_23 HRGMv2_4697_23_19 19800 21407 - 3.A.1.5.27
TC HRGMv2_4697_23 HRGMv2_4697_23_20 21786 24482 + 3.A.12.1.2
NULL(UNKNOWN) HRGMv2_4697_23 HRGMv2_4697_23_21 24574 24717 - NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_4697_23 HRGMv2_4697_23_22 24759 24896 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_4697_23 HRGMv2_4697_23_23 25913 27676 - 3.A.1.106.1
CAZyme HRGMv2_4697_23 HRGMv2_4697_23_24 28263 29534 + GT4
Gene ID: HRGMv2_4697_23_15
Type: TC
Location: 16401 - 17180 (-)
Gene ID: HRGMv2_4697_23_16
Type: TC
Location: 17177 - 17977 (-)
Gene ID: HRGMv2_4697_23_17
Type: TC
Location: 17974 - 18804 (-)
Gene ID: HRGMv2_4697_23_18
Type: TC
Location: 18801 - 19790 (-)
Gene ID: HRGMv2_4697_23_19
Type: TC
Location: 19800 - 21407 (-)
Gene ID: HRGMv2_4697_23_20
Type: TC
Location: 21786 - 24482 (+)
Gene ID: HRGMv2_4697_23_21
Type:
Location: 24574 - 24717 (-)
Gene ID: HRGMv2_4697_23_22
Type:
Location: 24759 - 24896 (-)
Gene ID: HRGMv2_4697_23_23
Type: TC
Location: 25913 - 27676 (-)
Gene ID: HRGMv2_4697_23_24
Type: CAZyme
Location: 28263 - 29534 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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