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Cluster: HRGMv2_4697_CGC50

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4697_20 HRGMv2_4697_20_23 22514 23584 + 9.B.34.1.1
pfam HRGMv2_4697_20 HRGMv2_4697_20_24 23679 24287 - PNPOx_N
TC HRGMv2_4697_20 HRGMv2_4697_20_25 24339 26105 - 2.A.37.1.2
pfam HRGMv2_4697_20 HRGMv2_4697_20_26 26429 26797 - GBBH-like_N
pfam HRGMv2_4697_20 HRGMv2_4697_20_27 26905 27954 + Radical_SAM | Mob_synth_C | Fer4_12
TC HRGMv2_4697_20 HRGMv2_4697_20_28 28125 29093 + 2.A.7.3.7
TC HRGMv2_4697_20 HRGMv2_4697_20_29 29095 30294 + 2.A.1.2.62
pfam HRGMv2_4697_20 HRGMv2_4697_20_30 30291 30917 + NTP_transf_3
pfam HRGMv2_4697_20 HRGMv2_4697_20_31 30914 31429 + MobB
CAZyme HRGMv2_4697_20 HRGMv2_4697_20_32 31709 33352 - CBM50 | CBM50
Gene ID: HRGMv2_4697_20_23
Type: TC
Location: 22514 - 23584 (+)
Gene ID: HRGMv2_4697_20_24
Type: pfam
Location: 23679 - 24287 (-)
Gene ID: HRGMv2_4697_20_25
Type: TC
Location: 24339 - 26105 (-)
Gene ID: HRGMv2_4697_20_26
Type: pfam
Location: 26429 - 26797 (-)
Gene ID: HRGMv2_4697_20_27
Type: pfam
Location: 26905 - 27954 (+)
Gene ID: HRGMv2_4697_20_28
Type: TC
Location: 28125 - 29093 (+)
Gene ID: HRGMv2_4697_20_29
Type: TC
Location: 29095 - 30294 (+)
Gene ID: HRGMv2_4697_20_30
Type: pfam
Location: 30291 - 30917 (+)
Gene ID: HRGMv2_4697_20_31
Type: pfam
Location: 30914 - 31429 (+)
Gene ID: HRGMv2_4697_20_32
Type: CAZyme
Location: 31709 - 33352 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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