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Cluster: HRGMv2_4697_CGC49

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4697_19 HRGMv2_4697_19_14 8574 9317 + GT25
TC HRGMv2_4697_19 HRGMv2_4697_19_15 9797 10543 + 5.A.1.2.7
TC HRGMv2_4697_19 HRGMv2_4697_19_16 10578 11516 + 2.A.69.3.4
pfam HRGMv2_4697_19 HRGMv2_4697_19_17 11500 12708 - FAD_binding_3
pfam HRGMv2_4697_19 HRGMv2_4697_19_18 12891 13643 + CDP-OH_P_transf
TC HRGMv2_4697_19 HRGMv2_4697_19_19 13844 15415 + 3.A.1.2.12
pfam HRGMv2_4697_19 HRGMv2_4697_19_20 15405 16496 + BPD_transp_2
TC HRGMv2_4697_19 HRGMv2_4697_19_21 16496 17416 + 3.A.1.2.12
Gene ID: HRGMv2_4697_19_14
Type: CAZyme
Location: 8574 - 9317 (+)
Gene ID: HRGMv2_4697_19_15
Type: TC
Location: 9797 - 10543 (+)
Gene ID: HRGMv2_4697_19_16
Type: TC
Location: 10578 - 11516 (+)
Gene ID: HRGMv2_4697_19_17
Type: pfam
Location: 11500 - 12708 (-)
Gene ID: HRGMv2_4697_19_18
Type: pfam
Location: 12891 - 13643 (+)
Gene ID: HRGMv2_4697_19_19
Type: TC
Location: 13844 - 15415 (+)
Gene ID: HRGMv2_4697_19_20
Type: pfam
Location: 15405 - 16496 (+)
Gene ID: HRGMv2_4697_19_21
Type: TC
Location: 16496 - 17416 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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