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Cluster: HRGMv2_4697_CGC43

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4697_13 HRGMv2_4697_13_76 75589 76230 + 2.A.53.3.8
CAZyme HRGMv2_4697_13 HRGMv2_4697_13_77 76407 77222 - GH103
pfam HRGMv2_4697_13 HRGMv2_4697_13_78 77444 78478 - Semialdhyde_dh | Semialdhyde_dhC
TC HRGMv2_4697_13 HRGMv2_4697_13_79 78990 80873 + 2.A.1.6.11
TC HRGMv2_4697_13 HRGMv2_4697_13_80 81066 82640 + 3.D.2.1.1
TC HRGMv2_4697_13 HRGMv2_4697_13_81 82661 84106 + 3.D.2.1.1
Gene ID: HRGMv2_4697_13_76
Type: TC
Location: 75589 - 76230 (+)
Gene ID: HRGMv2_4697_13_77
Type: CAZyme
Location: 76407 - 77222 (-)
Gene ID: HRGMv2_4697_13_78
Type: pfam
Location: 77444 - 78478 (-)
Gene ID: HRGMv2_4697_13_79
Type: TC
Location: 78990 - 80873 (+)
Gene ID: HRGMv2_4697_13_80
Type: TC
Location: 81066 - 82640 (+)
Gene ID: HRGMv2_4697_13_81
Type: TC
Location: 82661 - 84106 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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