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Cluster: HRGMv2_4697_CGC24

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4697_6 HRGMv2_4697_6_43 44306 45181 - 3.A.1.5.39
TC HRGMv2_4697_6 HRGMv2_4697_6_44 45181 46122 - 3.A.1.5.11
TC HRGMv2_4697_6 HRGMv2_4697_6_45 46229 47755 - 3.A.1.5.11
CAZyme HRGMv2_4697_6 HRGMv2_4697_6_46 48183 49307 + GT4
pfam HRGMv2_4697_6 HRGMv2_4697_6_47 49363 50163 + Acyl_transf_3
TC HRGMv2_4697_6 HRGMv2_4697_6_48 50769 51965 + 1.B.18.2.2
TC HRGMv2_4697_6 HRGMv2_4697_6_49 52247 53542 + 2.A.6.2.22
TC HRGMv2_4697_6 HRGMv2_4697_6_50 53542 56682 + 2.A.6.2.39
Gene ID: HRGMv2_4697_6_43
Type: TC
Location: 44306 - 45181 (-)
Gene ID: HRGMv2_4697_6_44
Type: TC
Location: 45181 - 46122 (-)
Gene ID: HRGMv2_4697_6_45
Type: TC
Location: 46229 - 47755 (-)
Gene ID: HRGMv2_4697_6_46
Type: CAZyme
Location: 48183 - 49307 (+)
Gene ID: HRGMv2_4697_6_47
Type: pfam
Location: 49363 - 50163 (+)
Gene ID: HRGMv2_4697_6_48
Type: TC
Location: 50769 - 51965 (+)
Gene ID: HRGMv2_4697_6_49
Type: TC
Location: 52247 - 53542 (+)
Gene ID: HRGMv2_4697_6_50
Type: TC
Location: 53542 - 56682 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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