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Cluster: HRGMv2_4697_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4697_4 HRGMv2_4697_4_186 213997 215442 + AA4
TF HRGMv2_4697_4 HRGMv2_4697_4_187 215561 216277 + GntR
pfam HRGMv2_4697_4 HRGMv2_4697_4_188 216473 217633 + FAA_hydrolase
TC HRGMv2_4697_4 HRGMv2_4697_4_189 217655 218185 + 2.A.56.1.2
TC HRGMv2_4697_4 HRGMv2_4697_4_190 218190 219467 + 2.A.56.1.9
TC HRGMv2_4697_4 HRGMv2_4697_4_191 219507 220514 + 2.A.56.1.9
TC HRGMv2_4697_4 HRGMv2_4697_4_192 220616 222568 - 4.C.1.1.6
Gene ID: HRGMv2_4697_4_186
Type: CAZyme
Location: 213997 - 215442 (+)
Gene ID: HRGMv2_4697_4_187
Type: TF
Location: 215561 - 216277 (+)
Gene ID: HRGMv2_4697_4_188
Type: pfam
Location: 216473 - 217633 (+)
Gene ID: HRGMv2_4697_4_189
Type: TC
Location: 217655 - 218185 (+)
Gene ID: HRGMv2_4697_4_190
Type: TC
Location: 218190 - 219467 (+)
Gene ID: HRGMv2_4697_4_191
Type: TC
Location: 219507 - 220514 (+)
Gene ID: HRGMv2_4697_4_192
Type: TC
Location: 220616 - 222568 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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