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Cluster: HRGMv2_4697_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4697_1 HRGMv2_4697_1_228 243810 245459 + 3.A.1.120.6
TF HRGMv2_4697_1 HRGMv2_4697_1_229 245619 246632 + HTH_5
pfam HRGMv2_4697_1 HRGMv2_4697_1_230 246634 247527 + MTHFR
CAZyme HRGMv2_4697_1 HRGMv2_4697_1_231 247993 249219 - GH103
CAZyme HRGMv2_4697_1 HRGMv2_4697_1_232 249342 250121 - GH25
pfam HRGMv2_4697_1 HRGMv2_4697_1_233 250353 251072 - Ubie_methyltran | Methyltransf_11 | Methyltransf_12 | Methyltransf_23 | Methyltransf_25 | Methyltransf_31
pfam HRGMv2_4697_1 HRGMv2_4697_1_234 251069 252319 - DUF3419
CAZyme HRGMv2_4697_1 HRGMv2_4697_1_235 252650 253729 - GH23
Gene ID: HRGMv2_4697_1_228
Type: TC
Location: 243810 - 245459 (+)
Gene ID: HRGMv2_4697_1_229
Type: TF
Location: 245619 - 246632 (+)
Gene ID: HRGMv2_4697_1_230
Type: pfam
Location: 246634 - 247527 (+)
Gene ID: HRGMv2_4697_1_231
Type: CAZyme
Location: 247993 - 249219 (-)
Gene ID: HRGMv2_4697_1_232
Type: CAZyme
Location: 249342 - 250121 (-)
Gene ID: HRGMv2_4697_1_233
Type: pfam
Location: 250353 - 251072 (-)
Gene ID: HRGMv2_4697_1_234
Type: pfam
Location: 251069 - 252319 (-)
Gene ID: HRGMv2_4697_1_235
Type: CAZyme
Location: 252650 - 253729 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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