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Cluster: HRGMv2_4697_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4697_4 HRGMv2_4697_4_169 184240 184986 - GT51
pfam HRGMv2_4697_4 HRGMv2_4697_4_170 185125 186039 + polyprenyl_synt
TC HRGMv2_4697_4 HRGMv2_4697_4_171 186070 186732 - 9.B.186.1.1
pfam HRGMv2_4697_4 HRGMv2_4697_4_172 186799 188049 - GcpE
TC HRGMv2_4697_4 HRGMv2_4697_4_173 188170 189360 - 2.A.1.60.3
TF HRGMv2_4697_4 HRGMv2_4697_4_174 189394 190173 - HTH_DeoR
TC HRGMv2_4697_4 HRGMv2_4697_4_175 190296 193757 - 3.B.1.1.1
TF HRGMv2_4697_4 HRGMv2_4697_4_176 193863 194600 - GerE
TC HRGMv2_4697_4 HRGMv2_4697_4_177 194936 196702 + 3.A.1.108.1
CAZyme HRGMv2_4697_4 HRGMv2_4697_4_178 197231 205726 - GH94 | GT84
Gene ID: HRGMv2_4697_4_169
Type: CAZyme
Location: 184240 - 184986 (-)
Gene ID: HRGMv2_4697_4_170
Type: pfam
Location: 185125 - 186039 (+)
Gene ID: HRGMv2_4697_4_171
Type: TC
Location: 186070 - 186732 (-)
Gene ID: HRGMv2_4697_4_172
Type: pfam
Location: 186799 - 188049 (-)
Gene ID: HRGMv2_4697_4_173
Type: TC
Location: 188170 - 189360 (-)
Gene ID: HRGMv2_4697_4_174
Type: TF
Location: 189394 - 190173 (-)
Gene ID: HRGMv2_4697_4_175
Type: TC
Location: 190296 - 193757 (-)
Gene ID: HRGMv2_4697_4_176
Type: TF
Location: 193863 - 194600 (-)
Gene ID: HRGMv2_4697_4_177
Type: TC
Location: 194936 - 196702 (+)
Gene ID: HRGMv2_4697_4_178
Type: CAZyme
Location: 197231 - 205726 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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