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Cluster: HRGMv2_4697_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4697_3 HRGMv2_4697_3_241 261224 262189 + 1.A.35.3.5
pfam HRGMv2_4697_3 HRGMv2_4697_3_242 262269 263222 + DUF808
pfam HRGMv2_4697_3 HRGMv2_4697_3_243 263521 264714 + HlyD_3
CAZyme HRGMv2_4697_3 HRGMv2_4697_3_244 264718 266691 + GT2
STP HRGMv2_4697_3 HRGMv2_4697_3_245 266705 267754 - dCache_1
TC HRGMv2_4697_3 HRGMv2_4697_3_246 268120 270345 - 9.B.34.1.1
TC HRGMv2_4697_3 HRGMv2_4697_3_247 270874 272469 + 3.A.1.5.22
TC HRGMv2_4697_3 HRGMv2_4697_3_248 272521 273444 + 3.A.1.5.22
TC HRGMv2_4697_3 HRGMv2_4697_3_249 273437 274567 + 3.A.1.5.22
TC HRGMv2_4697_3 HRGMv2_4697_3_250 274569 276179 + 3.A.1.5.24
Gene ID: HRGMv2_4697_3_241
Type: TC
Location: 261224 - 262189 (+)
Gene ID: HRGMv2_4697_3_242
Type: pfam
Location: 262269 - 263222 (+)
Gene ID: HRGMv2_4697_3_243
Type: pfam
Location: 263521 - 264714 (+)
Gene ID: HRGMv2_4697_3_244
Type: CAZyme
Location: 264718 - 266691 (+)
Gene ID: HRGMv2_4697_3_245
Type: STP
Location: 266705 - 267754 (-)
Gene ID: HRGMv2_4697_3_246
Type: TC
Location: 268120 - 270345 (-)
Gene ID: HRGMv2_4697_3_247
Type: TC
Location: 270874 - 272469 (+)
Gene ID: HRGMv2_4697_3_248
Type: TC
Location: 272521 - 273444 (+)
Gene ID: HRGMv2_4697_3_249
Type: TC
Location: 273437 - 274567 (+)
Gene ID: HRGMv2_4697_3_250
Type: TC
Location: 274569 - 276179 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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