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Cluster: HRGMv2_4697_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4697_3 HRGMv2_4697_3_127 137276 138265 + GT2
pfam HRGMv2_4697_3 HRGMv2_4697_3_128 138448 139413 - PS_pyruv_trans
CAZyme HRGMv2_4697_3 HRGMv2_4697_3_129 139465 140430 - GT2
TC HRGMv2_4697_3 HRGMv2_4697_3_130 140548 142026 + 2.A.66.2.2
pfam HRGMv2_4697_3 HRGMv2_4697_3_131 142398 143546 + Acyl_transf_3
CAZyme HRGMv2_4697_3 HRGMv2_4697_3_132 143551 144342 + GH16_21
NULL(UNKNOWN) HRGMv2_4697_3 HRGMv2_4697_3_133 144408 145589 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_4697_3 HRGMv2_4697_3_134 145607 146605 + GT2
CAZyme HRGMv2_4697_3 HRGMv2_4697_3_135 146602 147546 + GT2
CAZyme HRGMv2_4697_3 HRGMv2_4697_3_136 147546 148541 + GT2
pfam HRGMv2_4697_3 HRGMv2_4697_3_137 148609 149514 + NTP_transferase
TC HRGMv2_4697_3 HRGMv2_4697_3_138 149622 151970 + 8.A.3.1.1
pfam HRGMv2_4697_3 HRGMv2_4697_3_139 152216 153160 + 2-Hacid_dh_C | NAD_binding_2 | F420_oxidored
TC HRGMv2_4697_3 HRGMv2_4697_3_140 153178 156141 - 2.A.21.9.1
pfam HRGMv2_4697_3 HRGMv2_4697_3_141 156506 157504 + OpuAC
TC HRGMv2_4697_3 HRGMv2_4697_3_142 157717 158604 + 3.A.1.12.6
TC HRGMv2_4697_3 HRGMv2_4697_3_143 158597 159658 + 3.A.1.12.5
Gene ID: HRGMv2_4697_3_127
Type: CAZyme
Location: 137276 - 138265 (+)
Gene ID: HRGMv2_4697_3_128
Type: pfam
Location: 138448 - 139413 (-)
Gene ID: HRGMv2_4697_3_129
Type: CAZyme
Location: 139465 - 140430 (-)
Gene ID: HRGMv2_4697_3_130
Type: TC
Location: 140548 - 142026 (+)
Gene ID: HRGMv2_4697_3_131
Type: pfam
Location: 142398 - 143546 (+)
Gene ID: HRGMv2_4697_3_132
Type: CAZyme
Location: 143551 - 144342 (+)
Gene ID: HRGMv2_4697_3_133
Type:
Location: 144408 - 145589 (+)
Gene ID: HRGMv2_4697_3_134
Type: CAZyme
Location: 145607 - 146605 (+)
Gene ID: HRGMv2_4697_3_135
Type: CAZyme
Location: 146602 - 147546 (+)
Gene ID: HRGMv2_4697_3_136
Type: CAZyme
Location: 147546 - 148541 (+)
Gene ID: HRGMv2_4697_3_137
Type: pfam
Location: 148609 - 149514 (+)
Gene ID: HRGMv2_4697_3_138
Type: TC
Location: 149622 - 151970 (+)
Gene ID: HRGMv2_4697_3_139
Type: pfam
Location: 152216 - 153160 (+)
Gene ID: HRGMv2_4697_3_140
Type: TC
Location: 153178 - 156141 (-)
Gene ID: HRGMv2_4697_3_141
Type: pfam
Location: 156506 - 157504 (+)
Gene ID: HRGMv2_4697_3_142
Type: TC
Location: 157717 - 158604 (+)
Gene ID: HRGMv2_4697_3_143
Type: TC
Location: 158597 - 159658 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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