Cluster: HRGMv2_4658_CGC3
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4658
- CGC Family ID: CGCFAM_00003
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4658_25 | HRGMv2_4658_25_2 | 147 | 977 | + | GT2 |
| pfam | HRGMv2_4658_25 | HRGMv2_4658_25_3 | 987 | 1943 | + | 3Beta_HSD | Epimerase | Polysacc_synt_2 | RmlD_sub_bind | NmrA | NAD_binding_4 | NAD_binding_10 | GDP_Man_Dehyd |
| TC | HRGMv2_4658_25 | HRGMv2_4658_25_4 | 1918 | 2673 | + | 3.A.1.103.4 |
| TC | HRGMv2_4658_25 | HRGMv2_4658_25_5 | 2685 | 3458 | + | 3.A.1.103.4 |
| NULL(UNKNOWN) | HRGMv2_4658_25 | HRGMv2_4658_25_6 | 3472 | 5166 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_4658_25 | HRGMv2_4658_25_7 | 5184 | 5642 | + | GtrA_DPMS_TM |
| CAZyme | HRGMv2_4658_25 | HRGMv2_4658_25_8 | 5714 | 6856 | + | GT4 |
Gene ID: HRGMv2_4658_25_2
Type: CAZyme
Location: 147 - 977 (+)
Type: CAZyme
Location: 147 - 977 (+)
Gene ID: HRGMv2_4658_25_3
Type: pfam
Location: 987 - 1943 (+)
Type: pfam
Location: 987 - 1943 (+)
Gene ID: HRGMv2_4658_25_4
Type: TC
Location: 1918 - 2673 (+)
Type: TC
Location: 1918 - 2673 (+)
Gene ID: HRGMv2_4658_25_5
Type: TC
Location: 2685 - 3458 (+)
Type: TC
Location: 2685 - 3458 (+)
Gene ID: HRGMv2_4658_25_6
Type:
Location: 3472 - 5166 (+)
Type:
Location: 3472 - 5166 (+)
Gene ID: HRGMv2_4658_25_7
Type: pfam
Location: 5184 - 5642 (+)
Type: pfam
Location: 5184 - 5642 (+)
Gene ID: HRGMv2_4658_25_8
Type: CAZyme
Location: 5714 - 6856 (+)
Type: CAZyme
Location: 5714 - 6856 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
RF39
Family
UBA660
Genus
Fimihabitans
Species
Fimihabitans intestinipullorum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.